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Accueil > Publications

Publications Département Biologie des Génomes

Année 2015

- Interferences of silica nanoparticles in green fluorescent protein folding processes. Klein G, Devineau S, Aude JC, Boulard Y, Pasquier H, Labarre J, Pin S, Renault JP. Langmuir. 2015 Dec 9. [Epub ahead of print] PMID:26649773

- A σ factor and anti-σ factor that control swarming motility and biofilm formation in Pseudomonas aeruginosa. McGuffie BA, Vallet-Gely I, Dove SL. J Bacteriol. 2015 Nov 30. pii : JB.00784-15. [Epub ahead of print] PMID:26620262

- Post-transcriptional modulation of interleukin 8 by CNOT6L regulates skeletal muscle differentiation. Polesskaya A, Pinna G, Sassi Y, Vandamme M, Bigot A, Mouly V, Morozova N, Harel-Bellan A, Degerny C. Biochim Biophys Acta. 2015 Nov 23. pii : S0167-4889(15)00402-4. doi : 10.1016/j.bbamcr.2015.11.018. [Epub ahead of print] PMID:26608607

- ParTIES : a toolbox for Paramecium interspersed DNA elimination studies. Denby Wilkes C, Arnaiz O, Sperling L. Bioinformatics. 2015 Nov 20. pii : btv691. [Epub ahead of print] PMID:26589276

- A Dual Model for Prioritizing Cancer Mutations in the Non-coding Genome Based on Germline and Somatic Events. Li J, Poursat MA, Drubay D, Motz A, Saci Z, Morillon A, Michiels S, Gautheret D. PLoS Comput Biol. 2015 Nov 20 ;11(11):e1004583. doi : 10.1371/journal.pcbi.1004583. eCollection 2015 Nov. PMID:26588488

- The intriguing realm of protein biogenesis : Facing the green co-translational protein maturation networks. Breiman A, Fieulaine S, Meinnel T, Giglione C. Biochim Biophys Acta. 2015 Nov 9. pii : S1570-9639(15)00272-1. doi : 10.1016/j.bbapap.2015.11.002. [Epub ahead of print] Review. PMID:26555180

- Single Strand Annealing Plays a Major Role in RecA-Independent Recombination between Repeated Sequences in the Radioresistant Deinococcus radiodurans Bacterium. Ithurbide S, Bentchikou E, Coste G, Bost B, Servant P, Sommer S. PLoS Genet. 2015 Oct 30 ;11(10):e1005636. doi : 10.1371/journal.pgen.1005636. eCollection 2015 Oct. PMID:26517555

- New Functional Signatures for Understanding Melanoma Biology from Tumor Cell Lineage-Specific Analysis. Rambow F, Job B, Petit V, Gesbert F, Delmas V, Seberg H, Meurice G, Van Otterloo E, Dessen P, Robert C, Gautheret D, Cornell RA, Sarasin A, Larue L. Cell Rep. 2015 Oct 27 ;13(4):840-53. doi : 10.1016/j.celrep.2015.09.037. Epub 2015 Oct 17. PMID:26489459

- Copper homeostasis at the host vibrio interface : lessons from intracellular vibrio transcriptomics. Vanhove AS, Rubio TP, Nguyen AN, Lemire A, Roche D, Nicod J, Vergnes A, Poirier AC, Disconzi E, Bachère E, Le Roux F, Jacq A, Charrière GM, Destoumieux-Garzón D. Environ Microbiol. 2015 Oct 16. doi : 10.1111/1462-2920.13083. [Epub ahead of print] PMID:26472275

- Atad2 is a generalist facilitator of chromatin dynamics in embryonic stem cells. Morozumi Y, Boussouar F, Tan M, Chaikuad A, Jamshidikia M, Colak G, He H, Nie L, Petosa C, de Dieuleveult M, Curtet S, Vitte AL, Rabatel C, Debernardi A, Cosset FL, Verhoeyen E, Emadali A, Schweifer N, Gianni D, Gut M, Guardiola P, Rousseaux S, Gérard M, Knapp S, Zhao Y, Khochbin S. J Mol Cell Biol. 2015 Oct 12. pii : mjv060. [Epub ahead of print] PMID:26459632

- Temperate phages promote colicin-dependent fitness of Salmonella enterica serovar Typhimurium. Nedialkova LP, Sidstedt M, Koeppel MB, Spriewald S, Ring D, Gerlach RG, Bossi L, Stecher B. Environ Microbiol. 2015 Oct 6. doi : 10.1111/1462-2920.13077. [Epub ahead of print] PMID:26439675

- Mining the coding and non-coding genome for cancer drivers. Li J, Drubay D, Michiels S, Gautheret D. Cancer Lett. 2015 Dec 28 ;369(2):307-15. doi : 10.1016/j.canlet.2015.09.015. Epub 2015 Oct 1. PMID : 26433158

- Adaptive Horizontal Gene Transfers between Multiple Cheese-Associated Fungi. Ropars J, Rodríguez de la Vega RC, López-Villavicencio M, Gouzy J, Sallet E, Dumas É, Lacoste S, Debuchy R, Dupont J, Branca A, Giraud T. Curr Biol. 2015 Oct 5 ;25(19):2562-9. doi : 10.1016/j.cub.2015.08.025. Epub 2015 Sep 24. PMID:26412136

- Ion mobility coupled to native mass spectrometry as a relevant tool to investigate extremely small ligand-induced conformational changes. Stojko J, Fieulaine S, Petiot-Bécard S, Van Dorsselaer A, Meinnel T, Giglione C, Cianférani S. Analyst. 2015 Nov 7 ;140(21):7234-45. doi : 10.1039/c5an01311a. Epub 2015 Sep 24. PMID:26401526

- The abundant and essential HU proteins in Deinococcus deserti and Deinococcus radiodurans are translated from leaderless mRNA. Bouthier de la Tour C, Blanchard L, Dulermo R, Ludanyi M, Devigne A, Armengaud J, Sommer S, de Groot A. Microbiology. 2015 Sep 18. doi : 10.1099/mic.0.000186. [Epub ahead of print] PMID:26385459

- Fermentation and Alternative Respiration Compensate for NADH Dehydrogenase Deficiency in a Prokaryotic Model of DJ-1 Associated Parkinsonism. Messaoudi N, Gautier V, Dairou J, Mihoub M, Lelandais G, Bouloc P, Landoulsi A, Richarme G. Microbiology. 2015 Sep 15. doi : 10.1099/mic.0.000181. [Epub ahead of print] PMID : 26377309

- N-terminal modifications contribute to flowering time and immune response regulations. Kapos P, Xu F, Meinnel T, Giglione C, Li X. Plant Signal Behav. 2015 Oct 3 ;10(10):e1073874. doi : 10.1080/15592324.2015.1073874. PMID:26361095

- VING : a software for visualization of deep sequencing signals. Descrimes M, Ben Zouari Y, Wery M, Legendre R, Gautheret D, Morillon A. BMC Res Notes. 2015 Sep 7 ;8:419. doi : 10.1186/s13104-015-1404-5. PMID:26346985

- The emergence of Vibrio pathogens in Europe : ecology, evolution, and pathogenesis (Paris, 11-12th March 2015). Le Roux F, Wegner KM, Baker-Austin C, Vezzulli L, Osorio CR, Amaro C, Ritchie JM, Defoirdt T, Destoumieux-Garzón D, Blokesch M, Mazel D, Jacq A, Cava F, Gram L, Wendling CC, Strauch E, Kirschner A, Huehn S. Front Microbiol. 2015 Aug 13 ;6:830. doi : 10.3389/fmicb.2015.00830. eCollection 2015. PMID:26322036

- GARN : Sampling RNA 3D Structure Space with Game Theory and Knowledge-Based Scoring Strategies. Boudard M, Bernauer J, Barth D, Cohen J, Denise A. PLoS One. 2015 Aug 27 ;10(8):e0136444. doi : 10.1371/journal.pone.0136444. eCollection 2015. PMID:26313379

- Metagenome-based diversity analyses suggest a significant contribution of non-cyanobacterial lineages to carbonate precipitation in modern microbialites. Saghaï A, Zivanovic Y, Zeyen N, Moreira D, Benzerara K, Deschamps P, Bertolino P, Ragon M, Tavera R, López-Archilla AI, López-García P. Front Microbiol. 2015 Aug 5 ;6:797. doi : 10.3389/fmicb.2015.00797. eCollection 2015.PMID:26300865

- Adaptive aneuploidy protects against thiol peroxidase deficiency by increasing respiration via key mitochondrial proteins. Kaya A, Gerashchenko MV, Seim I, Labarre J, Toledano MB, Gladyshev VN. Proc Natl Acad Sci U S A. 2015 Aug 25 ;112(34):10685-90. doi : 10.1073/pnas.1505315112. Epub 2015 Aug 10. PMID:26261310

- Are the SSB-Interacting Proteins RecO, RecG, PriA and the DnaB-Interacting Protein Rep Bound to Progressing Replication Forks in Escherichia coli ? Bentchikou E, Chagneau C, Long E, Matelot M, Allemand JF, Michel B. PLoS One. 2015 Aug 5 ;10(8):e0134892. doi : 10.1371/journal.pone.0134892. eCollection 2015. PMID:26244508

- Mediator independently orchestrates multiple steps of preinitiation complex assembly in vivo. Eyboulet F, Wydau-Dematteis S, Eychenne T, Alibert O, Neil H, Boschiero C, Nevers MC, Volland H, Cornu D, Redeker V, Werner M, Soutourina J. Nucleic Acids Res. 2015 Oct 30 ;43(19):9214-31. doi : 10.1093/nar/gkv782. Epub 2015 Aug 3. PMID:26240385

- Revisiting the structure/function relationships of H/ACA(-like) RNAs : a unified model for Euryarchaea and Crenarchaea. Toffano-Nioche C, Gautheret D, Leclerc F. Nucleic Acids Res. 2015 Sep 18 ;43(16):7744-61. doi : 10.1093/nar/gkv756. Epub 2015 Aug 3. PMID:26240384

- Deletion of the MED13 and CDK8 subunits of the Mediator improves the phenotype of a long-lived respiratory deficient mutant of Podospora anserina. Humbert A, Bovier E, Sellem CH, Sainsard-Chanet A. Fungal Genet Biol. 2015 Sep ;82:228-37. doi : 10.1016/j.fgb.2015.07.010. Epub 2015 Jul 29. PMID:26231682

- Downregulation of N-terminal acetylation triggers ABA-mediated drought responses in Arabidopsis. Linster E, Stephan I, Bienvenut WV, Maple-Grødem J, Myklebust LM, Huber M, Reichelt M, Sticht C, Geir Møller S, Meinnel T, Arnesen T, Giglione C, Hell R, Wirtz M. Nat Commun. 2015 Jul 17 ;6:7640. doi : 10.1038/ncomms8640. PMID:26184543

- TFIIS-Dependent Non-coding Transcription Regulates Developmental Genome Rearrangements. Maliszewska-Olejniczak K, Gruchota J, Gromadka R, Denby Wilkes C, Arnaiz O, Mathy N, Duharcourt S, Bétermier M, Nowak JK. PLoS Genet. 2015 Jul 15 ;11(7):e1005383. doi : 10.1371/journal.pgen.1005383. eCollection 2015 Jul. PMID:26177014

- Rank aggregation with ties : Experiments and Analysis. Bryan Brancotte, Bo Yang, Guillaume Blin, Sarah Cohen Boulakia, Alain Denise, Sylvie Hamel. Proceedings of the VLDB Endowment 8(11) : 1202-1213 (2015) 8(11) : 1202-1213 (2015)

- Comparative genomics reveals conserved positioning of essential genomic clusters in highly rearranged Thermococcales chromosomes. Cossu M, Da Cunha V, Toffano-Nioche C, Forterre P, Oberto J. Biochimie. 2015 Nov ;118:313-21. doi : 10.1016/j.biochi.2015.07.008. Epub 2015 Jul 10. PMID:26166067

- Impact of exogenous stress on TGF-β inducible early gene 1 in human skin cells. Sobilo L, Kurfürst R, Loubens V, Martin M, Mondon P, Jeanneton O, Heusèle C, Ossant F, Lespessailles E, Toumi H, Crabbe L, Schnebert S. Exp Dermatol. 2015 Jun 29. doi : 10.1111/exd.12790. [Epub ahead of print] No abstract available. PMID:26119394

- Bacterial gene import and mesophilic adaptation in archaea. López-García P, Zivanovic Y, Deschamps P, Moreira D. Nat Rev Microbiol. 2015 Jul ;13(7):447-56. doi : 10.1038/nrmicro3485. Epub 2015 Jun 15. PMID:26075362

- Tight Chk1 Levels Control Replication Cluster Activation in Xenopus. Platel M, Goldar A, Wiggins JM, Barbosa P, Libeau P, Priam P, Narassimprakash H, Grodzenski X, Marheineke K. PLoS One. 2015 Jun 5 ;10(6):e0129090. doi : 10.1371/journal.pone.0129090. eCollection 2015. PMID:26046346

- Single nucleotide resolution RNA-seq uncovers new regulatory mechanisms in the opportunistic pathogen Streptococcus agalactiae. Rosinski-Chupin I, Sauvage E, Sismeiro O, Villain A, Da Cunha V, Caliot ME, Dillies MA, Trieu-Cuot P, Bouloc P, Lartigue MF, Glaser P. BMC Genomics. 2015 May 30 ;16:419. doi : 10.1186/s12864-015-1583-4. gov/pubmed/26024923" class='spip_out' rel='external'>PMID:26024923

- Proteome-wide analysis of the amino terminal status of Escherichia coli proteins at the steady-state and upon deformylation inhibition. Bienvenut WV, Giglione C, Meinnel T. Proteomics. 2015 Jul ;15(14):2503-18. doi : 10.1002/pmic.201500027. PMID:26017780

- Chromosomes Progress to Metaphase in Multiple Discrete Steps via Global Compaction/Expansion Cycles. Liang Z, Zickler D, Prentiss M, Chang FS, Witz G, Maeshima K, Kleckner N. Cell. 2015 May 21 ;161(5):1124-37. doi : 10.1016/j.cell.2015.04.030. PMID:26000485

- CTXφ Replication Depends on the Histone-Like HU Protein and the UvrD Helicase. Martínez E, Paly E, Barre FX. PLoS Genet. 2015 May 20 ;11(5):e1005256. doi : 10.1371/journal.pgen.1005256. eCollection 2015 May. PMID:25992634

- Meiotic crossover patterns : obligatory crossover, interference and homeostasis in a single process. Wang S, Zickler D, Kleckner N, Zhang L. Cell Cycle. 2015 ;14(3):305-14. doi : 10.4161/15384101.2014.991185.PMID:25590558

- Nucleoid organization in the radioresistant bacterium Deinococcus radiodurans. Passot FM, Nguyen HH, Dard-Dascot C, Thermes C, Servant P, Espéli O, Sommer S. Mol Microbiol. 2015 Aug ;97(4):759-74. doi : 10.1111/mmi.13064. Epub 2015 Jun 25. PMID:25988355

- Recombination, Pairing, and Synapsis of Homologs during Meiosis. Zickler D, Kleckner N. Cold Spring Harb Perspect Biol. 2015 May 18 ;7(6). pii : a016626. doi : 10.1101/cshperspect.a016626. Review. PMID:25986558

- RNA Degradation in Staphylococcus aureus : Diversity of Ribonucleases and Their Impact. Bonnin RA, Bouloc P. Int J Genomics. 2015 ;2015:395753. doi : 10.1155/2015/395753. Epub 2015 Apr 21. Review. PMID:25977913

- Diversity and comparative genomics of Microviridae in Sphagnum- dominated peatlands. Quaiser A, Dufresne A, Ballaud F, Roux S, Zivanovic Y, Colombet J, Sime-Ngando T, Francez AJ. Front Microbiol. 2015 Apr 28 ;6:375. doi : 10.3389/fmicb.2015.00375. eCollection 2015. PMID:25972855

- Two N-terminal acetyltransferases antagonistically regulate the stability of a nod-like receptor in Arabidopsis. Xu F, Huang Y, Li L, Gannon P, Linster E, Huber M, Kapos P, Bienvenut W, Polevoda B, Meinnel T, Hell R, Giglione C, Zhang Y, Wirtz M, Chen S, Li X. Plant Cell. 2015 May ;27(5):1547-62. doi : 10.1105/tpc.15.00173. Epub 2015 May 12. PMID:25966763

-  Molecular identification and functional characterization of the first Nα-acetyltransferase in plastids by global acetylome profiling. Dinh TV, Bienvenut WV, Linster E, Feldman-Salit A, Jung VA, Meinnel T, Hell R, Giglione C, Wirtz M. Proteomics. 2015 Jul ;15(14):2426-35. doi : 10.1002/pmic.201500025. Epub 2015 Jun 18. PMID:25951519

- Retrotransposons. An RNA polymerase III subunit determines sites of retrotransposon integration. Bridier-Nahmias A, Tchalikian-Cosson A, Baller JA, Menouni R, Fayol H, Flores A, Saïb A, Werner M, Voytas DF, Lesage P. Science. 2015 May 1 ;348(6234):585-8. doi : 10.1126/science.1259114. PMID:25931562

- Tracking the Elusive Function of Bacillus subtilis Hfq. Rochat T, Delumeau O, Figueroa-Bossi N, Noirot P, Bossi L, Dervyn E, Bouloc P. PLoS One. 2015 Apr 27 ;10(4):e0124977. doi : 10.1371/journal.pone.0124977. eCollection 2015. PMID:25915524

-  The BioMart community portal : an innovative alternative to large, centralized data repositories. Smedley D, Haider S, Durinck S, Pandini L, Provero P, Allen J, Arnaiz O, Awedh MH, Baldock R, Barbiera G, Bardou P, Beck T, Blake A, Bonierbale M, Brookes AJ, Bucci G, Buetti I, Burge S, Cabau C, Carlson JW, Chelala C, Chrysostomou C, Cittaro D, Collin O, Cordova R, Cutts RJ, Dassi E, Di Genova A, Djari A, Esposito A, Estrella H, Eyras E, Fernandez-Banet J, Forbes S, Free RC, Fujisawa T, Gadaleta E, Garcia-Manteiga JM, Goodstein D, Gray K, Guerra-Assunção JA, Haggarty B, Han DJ, Han BW, Harris T, Harshbarger J, Hastings RK, Hayes RD, Hoede C, Hu S, Hu ZL, Hutchins L, Kan Z, Kawaji H, Keliet A, Kerhornou A, Kim S, Kinsella R, Klopp C, Kong L, Lawson D, Lazarevic D, Lee JH, Letellier T, Li CY, Lio P, Liu CJ, Luo J, Maass A, Mariette J, Maurel T, Merella S, Mohamed AM, Moreews F, Nabihoudine I, Ndegwa N, Noirot C, Perez-Llamas C, Primig M, Quattrone A, Quesneville H, Rambaldi D, Reecy J, Riba M, Rosanoff S, Saddiq AA, Salas E, Sallou O, Shepherd R, Simon R, Sperling L, Spooner W, Staines DM, Steinbach D, Stone K, Stupka E, Teague JW, Dayem Ullah AZ, Wang J, Ware D, Wong-Erasmus M, Youens-Clark K, Zadissa A, Zhang SJ, Kasprzyk A. Nucleic Acids Res. 2015 Jul 1 ;43(W1):W589-98. doi : 10.1093/nar/gkv350. Epub 2015 Apr 20. PMID:25897122

- Identification of new genes contributing to the extreme radioresistance of Deinococcus radiodurans using a Tn5-based transposon mutant library. Dulermo R, Onodera T, Coste G, Passot F, Dutertre M, Porteron M, Confalonieri F, Sommer S, Pasternak C. PLoS One. 2015 Apr 17 ;10(4):e0124358. doi : 10.1371/journal.pone.0124358. eCollection 2015. PMID:25884619

- Erratum : A vlincRNA participates in senescence maintenance by relieving H2AZ-mediated repression at the INK4 locus. Lazorthes S, Vallot C, Briois S, Aguirrebengoa M, Thuret JY, St Laurent G, Rougeulle C, Kapranov P, Mann C, Trouche D, Nicolas E. Nat Commun. 2015 Apr 8 ;6:6918. doi : 10.1038/ncomms7918. PMID:25850412

- Clustering of mammalian Hox genes with other H3K27me3 targets within an active nuclear domain. Vieux-Rochas M, Fabre PJ, Leleu M, Duboule D, Noordermeer D. Proc Natl Acad Sci U S A. 2015 Apr 14 ;112(15):4672-7. doi : 10.1073/pnas.1504783112. Epub 2015 Mar 30. PMID:25825760

-  RiboTools : a Galaxy toolbox for qualitative ribosome profiling analysis. Legendre R, Baudin-Baillieu A, Hatin I, Namy O. Bioinformatics. 2015 Aug 1 ;31(15):2586-8. doi : 10.1093/bioinformatics/btv174. Epub 2015 Mar 25. PMID:25812744

- Aminoacyl-tRNA synthetase complexes in evolution. Havrylenko S, Mirande M. Int J Mol Sci. 2015 Mar 23 ;16(3):6571-94. doi : 10.3390/ijms16036571. Review. PMID:25807264

- RNA modification : the Golden Period 1995-2015. Grosjean H. RNA. 2015 Apr ;21(4):625-6. doi : 10.1261/rna.049866.115. PMID:25780166

- An assessment of bacterial small RNA target prediction programs. Pain A, Ott A, Amine H, Rochat T, Bouloc P, Gautheret D. RNA Biol. 2015 ;12(5):509-13. doi : 10.1080/15476286.2015.1020269. PMID:25760244

- DdrO is an essential protein that regulates the radiation desiccation response and the apoptotic-like cell death in the radioresistant Deinococcus radiodurans bacterium. Devigne A, Ithurbide S, Bouthier de la Tour C, Passot F, Mathieu M, Sommer S, Servant P. Mol Microbiol. 2015 Jun ;96(5):1069-84. doi : 10.1111/mmi.12991. Epub 2015 Apr 7. PMID:25754115

- Whole-genome mapping of 5’ RNA ends in bacteria by tagged sequencing : a comprehensive view in Enterococcus faecalis. Innocenti N, Golumbeanu M, Fouquier d’Hérouël A, Lacoux C, Bonnin RA, Kennedy SP, Wessner F, Serror P, Bouloc P, Repoila F, Aurell E. RNA. 2015 May ;21(5):1018-30. doi : 10.1261/rna.048470.114. Epub 2015 Mar 3. PMID:25737579

- New insights into stop codon recognition by eRF1. Blanchet S, Rowe M, Von der Haar T, Fabret C, Demais S, Howard MJ, Namy O. Nucleic Acids Res. 2015 Mar 31 ;43(6):3298-308. doi : 10.1093/nar/gkv154. Epub 2015 Mar 3. PMID:25735746

- No evidence of inhibition of horizontal gene transfer by CRISPR-Cas on evolutionary timescales. Gophna U, Kristensen DM, Wolf YI, Popa O, Drevet C, Koonin EV. ISME J. 2015 Sep ;9(9):2021-7. doi : 10.1038/ismej.2015.20. Epub 2015 Feb 24. PMID : 25710183

- In plants, decapping prevents RDR6-dependent production of small interfering RNAs from endogenous mRNAs. Martínez de Alba AE, Moreno AB, Gabriel M, Mallory AC, Christ A, Bounon R, Balzergue S, Aubourg S, Gautheret D, Crespi MD, Vaucheret H, Maizel A. Nucleic Acids Res. 2015 Mar 11 ;43(5):2902-13. doi : 10.1093/nar/gkv119. Epub 2015 Feb 18. PMID:25694514

- miRNA expression in control and FSHD fetal human muscle biopsies. Portilho DM, Alves MR, Kratassiouk G, Roche S, Magdinier F, de Santana EC, Polesskaya A, Harel-Bellan A, Mouly V, Savino W, Butler-Browne G, Dumonceaux J. PLoS One. 2015 Feb 18 ;10(2):e0116853. doi : 10.1371/journal.pone.0116853. eCollection 2015. PMID:25692472

- Global reorganization of the nuclear landscape in senescent cells. Chandra T, Ewels PA, Schoenfelder S, Furlan-Magaril M, Wingett SW, Kirschner K, Thuret JY, Andrews S, Fraser P, Reik W. Cell Rep. 2015 Feb 3 ;10(4):471-83. doi : 10.1016/j.celrep.2014.12.055. Epub 2015 Jan 29. PMID:25640177

- TNF-α and IGF1 modify the microRNA signature in skeletal muscle cell differentiation. Meyer SU, Thirion C, Polesskaya A, Bauersachs S, Kaiser S, Krause S, Pfaffl MW. Cell Commun Signal. 2015 Jan 29 ;13:4. doi : 10.1186/s12964-015-0083-0. PMID:25630602

- The striatal long noncoding RNA Abhd11os is neuroprotective against an N-terminal fragment of mutant huntingtin in vivo. Francelle L, Galvan L, Gaillard MC, Petit F, Bernay B, Guillermier M, Bonvento G, Dufour N, Elalouf JM, Hantraye P, Déglon N, de Chaldée M, Brouillet E. Neurobiol Aging. 2015 Mar ;36(3):1601.e7-16. doi : 10.1016/j.neurobiolaging.2014.11.014. Epub 2014 Dec 18. PMID:25619660

- A vlincRNA participates in senescence maintenance by relieving H2AZ-mediated repression at the INK4 locus. Lazorthes S, Vallot C, Briois S, Aguirrebengoa M, Thuret JY, St Laurent G, Rougeulle C, Kapranov P, Mann C, Trouche D, Nicolas E. Nat Commun. 2015 Jan 20 ;6:5971. doi : 10.1038/ncomms6971. Erratum in : Nat Commun. 2015 ;6:6918. PMID:25601475

- Recombineering applications for the mutational analysis of bacterial RNA-binding proteins and their sites of action. Figueroa-Bossi N, Bossi L. Methods Mol Biol. 2015 ;1259:103-16. doi : 10.1007/978-1-4939-2214-7_7. PMID : 25579582

- Drawing and editing the secondary structure(s) of RNA. Ponty Y, Leclerc F. Methods Mol Biol. 2015 ;1269:63-100. doi : 10.1007/978-1-4939-2291-8_5. PMID:25577373

- High-resolution genetic analysis of the requirements for horizontal transmission of the ESBL plasmid from Escherichia coli O104:H4. Yamaichi Y, Chao MC, Sasabe J, Clark L, Davis BM, Yamamoto N, Mori H, Kurokawa K, Waldor MK. Nucleic Acids Res. 2015 Jan ;43(1):348-60. doi : 10.1093/nar/gku1262. Epub 2014 Dec 3. PMID:25477379

- N-terminal protein modifications : Bringing back into play the ribosome. Giglione C, Fieulaine S, Meinnel T. Biochimie. 2015 Jul ;114:134-46. doi : 10.1016/j.biochi.2014.11.008. Epub 2014 Nov 18. Review. PMID:25450248

-  Molecular diversity of Chickpea chlorotic dwarf virus in Sudan : high rates of intra-species recombination - a driving force in the emergence of new strains. Kraberger S, Kumari SG, Hamed AA, Gronenborn B, Thomas JE, Sharman M, Harkins GW, Muhire BM, Martin DP, Varsani A. Infect Genet Evol. 2015 Jan ;29:203-15. doi : 10.1016/j.meegid.2014.11.024. Epub 2014 Nov 29. PMID:25444941

- Primary and secondary siRNA synthesis triggered by RNAs from food bacteria in the ciliate Paramecium tetraurelia. Carradec Q, Götz U, Arnaiz O, Pouch J, Simon M, Meyer E, Marker S. Nucleic Acids Res. 2015 Feb 18 ;43(3):1818-33. doi : 10.1093/nar/gku1331. Epub 2015 Jan 15. PMID:25593325

miR-98 delays skeletal muscle differentiation by down-regulating E2F5. Kropp J, Degerny C, Morozova N, Pontis J, Harel-Bellan A, Polesskaya A. Biochem J. 2015 Feb 15 ;466(1):85-93. doi : 10.1042/BJ20141175. PMID:25422988

- Loss of the thyroid hormone-binding protein Crym renders striatal neurons more vulnerable to mutant huntingtin in Huntington’s disease. Francelle L, Galvan L, Gaillard MC, Guillermier M, Houitte D, Bonvento G, Petit F, Jan C, Dufour N, Hantraye P, Elalouf JM, De Chaldée M, Déglon N, Brouillet E. Hum Mol Genet. 2015 Mar 15 ;24(6):1563-73. doi : 10.1093/hmg/ddu571. Epub 2014 Nov 14. PMID:25398949

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