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Publications Département Microbiologie

Année 2016

- Biomineralization Patterns of Intracellular Carbonatogenesis in Cyanobacteria : Molecular Hypotheses Jinhua Li, Isabel Margaret Oliver, Nithavong Cam, Thomas Boudier, Marine Blondeau, Eric Leroy, Julie Cosmidis, Feriel Skouri-Panet, Jean-Michel Guigner, Céline Férard, Melanie Poinsot, David Moreira, Purificacion Lopez-Garcia, Corinne Cassier-Chauvat, Franck Chauvat and Karim Benzerara Minerals 2016, 6(1), 10 ; doi:10.3390/min6010010

- Oxidative-stress detoxification and signalling in cyanobacteria : the crucial glutathione synthesis pathway supports the production of ergothioneine and ophthalmate. K. Narainsamy, S. Farci, E. Braun, C. Junot, C. Cassier-Chauvat, and F. Chauvat. Mol. Microbiol. 2016 Apr ;100(1):15-24. doi : 10.1111/mmi.13296. Epub 2016 Feb 9. PMID:26713511

- Comparison of French and Worldwide Bacillus anthracis Strains Favors a Recent, Post-Columbian Origin of the Predominant North-American Clade. Vergnaud G, Girault G, Thierry S, Pourcel C, Madani N, Blouin Y. PLoS One. 2016 Feb 22 ;11(2):e0146216. doi : 10.1371/journal.pone.0146216. eCollection 2016.

- Pseudolysogeny and sequential mutations build multiresistance to virulent bacteriophages in Pseudomonas aeruginosa. Latino L, Midoux C, Hauck Y, Vergnaud G, Pourcel C.Microbiology. 2016 Feb 25. doi : 10.1099/mic.0.000263. [Epub ahead of print] PMID:26921273

- Brucella vulpis sp. nov., a novel Brucella species isolated from mandibular lymph nodes of red foxes (Vulpes vulpes) in Austria. Scholz HC, Revilla-Fernández S, Al Dahouk S, Hammerl JA, Zygmunt MS, Cloeckaert A, Koylass M, Whatmore AM, Blom J, Vergnaud G, Witte A, Aistleitner K, Hofer E. Int J Syst Evol Microbiol. 2016 Feb 29. doi : 10.1099/ijsem.0.000998. [Epub ahead of print] PMID:26928956

- Complete Genome Sequence of PM105, a New Pseudomonas aeruginosa B3-Like Transposable Phage. Pourcel C, Midoux C, Bourkaltseva M, Pleteneva E, Krylov V.
Genome Announc. 2016 Mar 3 ;4(2). pii:e01543-15.doi:10.1128/genomeA.01543-15. PMID:26941153

- Identification and Partial Characterization of a Novel UDP-N-Acetylenolpyruvoylglucosamine Reductase/UDP-N-Acetylmuramate:l-Alanine Ligase Fusion Enzyme from Verrucomicrobium spinosum DSM 4136(T). Naqvi KF, Patin D, Wheatley MS, Savka MA, Dobson RC, Gan HM, Barreteau H, Blanot D, Mengin-Lecreulx D, Hudson AO. Front Microbiol. 2016 Mar 23 ;7:362. doi : 10.3389/fmicb.2016.00362. eCollection 2016. PMID:27047475

- Crystallographic Study of Peptidoglycan Biosynthesis Enzyme MurD : Domain Movement Revisited. Šink R, Kotnik M, Zega A, Barreteau H, Gobec S, Blanot D, Dessen A, Contreras-Martel C. PLoS One. 2016 Mar 31 ;11(3):e0152075. doi : 10.1371/journal.pone.0152075. eCollection 2016. PMID : 27031227

- The plant GABA signaling downregulates horizontal transfer of the Agrobacterium tumefaciens virulence plasmid.Lang J, Gonzalez-Mula A, Taconnat L, Clement G, Faure D.New Phytol. 2015 Dec 30. doi : 10.1111/nph.13813. Epub ahead of print

- Engineering the Rhizosphere.Dessaux Y, Grandclément C, Faure D.Trends Plant Sci. 2016 Jan 23. pii : S1360-1385(16)00003-0. doi : 10.1016/j.tplants.2016.01.002. [Epub ahead of print] Review.PMID : 26818718

- Unusual substrate specificity of the peptidoglycan MurE ligase from Erysipelothrix rhusiopathiae. Patin D, Turk S, Barreteau H, Mainardi JL, Arthur M, Gobec S, Mengin-Lecreulx D, Blanot D. Biochimie. 2016 Feb ;121:209-18. doi : 10.1016/j.biochi.2015.12.006. Epub 2015 Dec 14.PMID:26700151

- Evidence for the negative regulation of phytase gene expression in Streptomyces lividans and Streptomyces coelicolor. Boukhris I, Dulermo T, Chouayekh H, Virolle MJ. J Basic Microbiol. 2016 Jan ;56(1):59-66. doi : 10.1002/jobm.201500417. Epub 2015 Sep 11. PMID:26781207

Année 2015

- Oxidative-stress detoxification and signaling in cyanobacteria : The crucial glutathione synthesis pathway supports the production of ergothioneine and ophthalmate. Narainsamy K, Farci S, Braun E, Junot C, Cassier-Chauvat C, Chauvat F. Mol Microbiol. 2015 Dec 29. doi : 10.1111/mmi.13296. [Epub ahead of print]

- Whole-Genome Sequence of Stenotrophomonas maltophilia ZBG7B Reveals Its Biotechnological Potential.Chan KG, Chong TM, Adrian TG, Kher HL, Hong KW, Grandclément C, Faure D, Yin WF, Dessaux Y.Genome Announc. 2015 Dec 10 ;3(6). pii : e01442-15. doi : 10.1128/genomeA.01442-15. PMID:26659682

- Predictive ecology in a changing world. Nicolas Mouquet, Yvan Lagadeuc, Vincent Devictor, Luc Doyen, Anne Duputié et al. Journal of Applied Ecology, 2015, 52 (5), pp.1293-1310. <10.1111/1365-2664.12482>

- Burkholderia of Plant-Beneficial Group are Symbiotically Associated with Bordered Plant Bugs (Heteroptera : Pyrrhocoroidea : Largidae).Takeshita K, Matsuura Y, Itoh H, Navarro R, Hori T, Sone T, Kamagata Y, Mergaert P, Kikuchi Y.Microbes Environ. 2015 Dec 22 ;30(4):321-9. doi : 10.1264/jsme2.ME15153. Epub 2015 Dec 9.PMID : 26657305

- Selecting appropriate empirical antibiotic regimens for paediatric bloodstream infections : application of a Bayesian decision model to local and pooled antimicrobial resistance surveillance data. Bielicki JA, Sharland M, Johnson AP, Henderson KL, Cromwell DA ; Antibiotic Resistance and Prescribing in European Children project.
J Antimicrob Chemother. 2015 Nov 30. pii : dkv397. [Epub ahead of print]
PMID : 26626717

- A Snapshot of the Extraordinary World of Social Microbiology.Stanley-Wall NR, Coulthurst SJ, Holland IB. J Mol Biol. 2015 Nov 20 ;427(23):3625-7. doi : 10.1016/j.jmb.2015.10.012. Epub 2015 Oct 27. No abstract available. PMID:26518741

- Dectin-1 activation unlocks IL12A expression and reveals the TH1 potency of neonatal dendritic cells.Lemoine S, Jaron B, Tabka S, Ettreiki C, Deriaud E, Zhivaki D, Le Ray C, Launay O, Majlessi L, Tissieres P, Leclerc C, Lo-Man R. J Allergy Clin Immunol. 2015 Nov ;136(5):1355-1368.e15. doi : 10.1016/j.jaci.2015.02.030. Epub 2015 Apr 10.PMID:25865351

- Membrane Topology and Biochemical Characterization of the Escherichia coli BacA Undecaprenyl-Pyrophosphate Phosphatase. Manat G, El Ghachi M, Auger R, Baouche K, Olatunji S, Kerff F, Touzé T, Mengin-Lecreulx D, Bouhss A. PLoS One. 2015 Nov 11 ;10(11):e0142870. doi : 10.1371/journal.pone.0142870. eCollection 2015. PMID:26560897

- Natural Guided Genome Engineering Reveals Transcriptional Regulators Controlling Quorum-Sensing Signal Degradation. El Sahili A, Kwasiborski A, Mothe N, Velours C, Legrand P, Moréra S, Faure D. PLoS One. 2015 Nov 10 ;10(11):e0141718. doi : 10.1371/journal.pone.0141718. eCollection 2015. PMID:26554837

- Outcomes of Preterm Neonates Transferred Between Tertiary Perinatal Centers.
Longhini F, Jourdain G, Ammar F, Mokthari M, Boithias C, Romain O, Letamendia E, Tissieres P, Chabernaud JL, De Luca D.Pediatr Crit Care Med. 2015 Oct ;16(8):733-8. doi : 10.1097/PCC.0000000000000482. PMID:26132742

- Modification of atmospheric sand-associated bacterial communities during Asian sandstorms in China and South Korea. An S, Sin HH, DuBow MS. Heredity (Edinb). 2015 May ;114(5):460-7. doi : 10.1038/hdy.2014.102. Epub 2014 Nov 12.

- Sinorhizobium fredii HH103 bacteroids are not terminally differentiated and show altered O-antigen in nodules of the IRLC legume Glycyrrhiza uralensis. Crespo-Rivas JC, Guefrachi I, Mok KC, Villaécija-Aguilar JA, Acosta-Jurado S, Pierre O, Ruiz-Sainz JE, Taga ME, Mergaert P, Vinardell JM. Environ Microbiol. 2015 Nov 2. doi : 10.1111/1462-2920.13101. [Epub ahead of print] PMID:26521863

- Alternatively spliced, spliceosomal twin introns in Helminthosporium solani. Ág N, Flipphi M, Karaffa L, Scazzocchio C, Fekete E. Fungal Genet Biol. 2015 Dec ;85:7-13. doi : 10.1016/j.fgb.2015.10.004. Epub 2015 Oct 26. PMID:26514742

- Atmospheric pressure argon surface discharges propagated in long tubes : physical characterization and application to bio-decontamination. Kovalova Z, Leroy M, Jacobs C, Kirkpatrick MJ , Machala Z, Lopes F, Laux CO, DuBow MS and Odic E. J of Physics D : Applied Physics. 2015 Oct ; 48 464003

- The Stable Interaction Between Signal-Peptidase LepB of Escherichia coli and Nuclease Bacteriocins Promotes Toxin Entry into the Cytoplasm. Mora L, Moncoq K, England P, Oberto J, de Zamaroczy M. J Biol Chem. 2015 Oct 23. pii : jbc.M115.691907. [Epub ahead of print] PMID:26499796

-  Biocontrol of the potato blackleg and soft-rot diseases caused by Dickeya dianthicola. Raoul des Essarts Y, Cigna J, Quêtu-Laurent A, Caron A, Munier E, Beury-Cirou A, Hélias V, Faure D. Appl Environ Microbiol. 2015 Oct 23. pii : AEM.02525-15. [Epub ahead of print] PMID : 26497457

- Population genomics reveals additive and replacing horizontal gene transfers in the emerging pathogen Dickeya solani. Khayi S, Blin P, Pédron J, Chong TM, Chan KG, Moumni M, Hélias V, Van Gijsegem F, Faure D. BMC Genomics. 2015 Oct 14 ;16(1):788. doi : 10.1186/s12864-015-1997-z. PMID : 26467299

- Quorum quenching : role in nature and applied developments. Grandclément C, Tannières M, Moréra S, Dessaux Y, Faure DD. FEMS Microbiol Rev. 2015 Oct 1. pii : fuv038. [Epub ahead of print] Review. PMID : 26432822

- Complete genome sequence of Streptomyces ambofaciens ATCC 23877, the spiramycin producer. Thibessard A, Haas D, Gerbaud C, Aigle B, Lautru S, Pernodet JL, Leblond P. J Biotechnol. 2015 Nov 20 ;214:117-8. doi : 10.1016/j.jbiotec.2015.09.020. Epub 2015 Sep 26. PMID : 26410452

-  Special section on Molecular biology of Archaea. Prangishvili D, Gribaldo S, Franzetti B, Forterre P. Biochimie. 2015 Nov ;118:253. doi : 10.1016/j.biochi.2015.09.020. Epub 2015 Sep 25. No abstract available. PMID:26403496

- c-Type Cytochrome Assembly Is a Key Target of Copper Toxicity within the Bacterial Periplasm. Durand A, Azzouzi A, Bourbon ML, Steunou AS, Liotenberg S, Maeshima A, Astier C, Argentini M, Saito S, Ouchane S. MBio. 2015 Sep 22 ;6(5):e01007-15. doi : 10.1128/mBio.01007-15. PMID : 26396241

- Insights into Substrate Specificity of NlpC/P60 Cell Wall Hydrolases Containing Bacterial SH3 Domains. Xu Q, Mengin-Lecreulx D, Liu XW, Patin D, Farr CL, Grant JC, Chiu HJ, Jaroszewski L, Knuth MW, Godzik A, Lesley SA, Elsliger MA, Deacon AM, Wilson IA. MBio. 2015 Sep 15 ;6(5):e02327-14. doi : 10.1128/mBio.02327-14. PMID:26374125

- Sulfolobus Spindle-Shaped Virus 1 Contains Glycosylated Capsid Proteins, a Cellular Chromatin Protein, and Host-Derived Lipids. Quemin ER, Pietilä MK, Oksanen HM, Forterre P, Rijpstra WI, Schouten S, Bamford DH, Prangishvili D, Krupovic M. J Virol. 2015 Nov 15 ;89(22):11681-91. doi : 10.1128/JVI.02270-15. Epub 2015 Sep 9. PMID : 26355093

- Characterization of Sviceucin from Streptomyces Provides Insight into Enzyme Exchangeability and Disulfide Bond Formation in Lasso Peptides. Li Y, Ducasse R, Zirah S, Blond A, Goulard C, Lescop E, Giraud C, Hartke A, Guittet E, Pernodet JL, Rebuffat S. ACS Chem Biol. 2015 Nov 20 ;10(11):2641-9. doi : 10.1021/acschembio.5b00584. Epub 2015 Sep 21. PMID:26343290

- Interaction of Yna1 and Yna2 Is Required for Nuclear Accumulation and Transcriptional Activation of the Nitrate Assimilation Pathway in the Yeast Hansenula polymorpha. Silvestrini L, Rossi B, Gallmetzer A, Mathieu M, Scazzocchio C, Berardi E, Strauss J. PLoS One. 2015 Sep 3 ;10(9):e0135416. doi : 10.1371/journal.pone.0135416. eCollection 2015. PMID : 26335797

- E-DNA sensor of Mycobacterium tuberculosis based on electrochemical assembly of nanomaterials (MWCNTs/PPy/PAMAM). Miodek A, Mejri N, Gomgnimbou M, Sola C, Korri-Youssoufi H. Anal Chem. 2015 Sep 15 ;87(18):9257-64. doi : 10.1021/acs.analchem.5b01761. Epub 2015 Aug 27. PMID:26313137

- Environmental microbiology as a mosaic of explored ecosystems and issues. Faure D, Bonin P, Duran R ; Microbial Ecology EC2CO consortium. Environ Sci Pollut Res Int. 2015 Sep ;22(18):13577-98. doi : 10.1007/s11356-015-5164-5. Epub 2015 Aug 27. PMID:26310700

-  Refining the pH response in Aspergillus nidulans : a modulatory triad involving PacX, a novel zinc binuclear cluster protein. Bussink HJ, Bignell EM, Múnera-Huertas T, Lucena-Agell D, Scazzocchio C, Espeso EA, Bertuzzi M, Rudnicka J, Negrete-Urtasun S, Peñas-Parilla MM, Rainbow L, Peñalva MÁ, Arst HN Jr, Tilburn J. Mol Microbiol. 2015 Aug 25. doi : 10.1111/mmi.13173. [Epub ahead of print] PMID:26303777

- Convergent Evolution of Endosymbiont Differentiation in Dalbergioid and Inverted Repeat-Lacking Clade Legumes Mediated by Nodule-Specific Cysteine-Rich Peptides. Czernic P, Gully D, Cartieaux F, Moulin L, Guefrachi I, Patrel D, Pierre O, Fardoux J, Chaintreuil C, Nguyen P, Gressent F, Da Silva C, Poulain J, Wincker P, Rofidal V, Hem S, Barrière Q, Arrighi JF, Mergaert P, Giraud E. Plant Physiol. 2015 Oct ;169(2):1254-65. doi : 10.1104/pp.15.00584. Epub 2015 Aug 18. PMID:26286718

- Minimum Information about a Biosynthetic Gene cluster. Medema MH, Kottmann R, Yilmaz P, Cummings M, Biggins JB, Blin K, de Bruijn I, Chooi YH, Claesen J, Coates RC, Cruz-Morales P, Duddela S, Düsterhus S, Edwards DJ, Fewer DP, Garg N, Geiger C, Gomez-Escribano JP, Greule A, Hadjithomas M, Haines AS, Helfrich EJ, Hillwig ML, Ishida K, Jones AC, Jones CS, Jungmann K, Kegler C, Kim HU, Kötter P, Krug D, Masschelein J, Melnik AV, Mantovani SM, Monroe EA, Moore M, Moss N, Nützmann HW, Pan G, Pati A, Petras D, Reen FJ, Rosconi F, Rui Z, Tian Z, Tobias NJ, Tsunematsu Y, Wiemann P, Wyckoff E, Yan X, Yim G, Yu F, Xie Y, Aigle B, Apel AK, Balibar CJ, Balskus EP, Barona-Gómez F, Bechthold A, Bode HB, Borriss R, Brady SF, Brakhage AA, Caffrey P, Cheng YQ, Clardy J, Cox RJ, De Mot R, Donadio S, Donia MS, van der Donk WA, Dorrestein PC, Doyle S, Driessen AJ, Ehling-Schulz M, Entian KD, Fischbach MA, Gerwick L, Gerwick WH, Gross H, Gust B, Hertweck C, Höfte M, Jensen SE, Ju J, Katz L, Kaysser L, Klassen JL, Keller NP, Kormanec J, Kuipers OP, Kuzuyama T, Kyrpides NC, Kwon HJ, Lautru S, Lavigne R, Lee CY, Linquan B, Liu X, Liu W, Luzhetskyy A, Mahmud T, Mast Y, Méndez C, Metsä-Ketelä M, Micklefield J, Mitchell DA, Moore BS, Moreira LM, Müller R, Neilan BA, Nett M, Nielsen J, O’Gara F, Oikawa H, Osbourn A, Osburne MS, Ostash B, Payne SM, Pernodet JL, Petricek M, Piel J, Ploux O, Raaijmakers JM, Salas JA, Schmitt EK, Scott B, Seipke RF, Shen B, Sherman DH, Sivonen K, Smanski MJ, Sosio M, Stegmann E, Süssmuth RD, Tahlan K, Thomas CM, Tang Y, Truman AW, Viaud M, Walton JD, Walsh CT, Weber T, van Wezel GP, Wilkinson B, Willey JM, Wohlleben W, Wright GD, Ziemert N, Zhang C, Zotchev SB, Breitling R, Takano E, Glöckner FO. Nat Chem Biol. 2015 Sep ;11(9):625-31. doi : 10.1038/nchembio.1890. No abstract available. PMID : 26284661

- The Absence of Pupylation (Prokaryotic Ubiquitin-Like Protein Modification) Affects Morphological and Physiological Differentiation in Streptomyces coelicolor. Boubakri H, Seghezzi N, Duchateau M, Gominet M, Kofroňová O, Benada O, Mazodier P, Pernodet JL. J Bacteriol. 2015 Nov 1 ;197(21):3388-99. doi : 10.1128/JB.00591-15. Epub 2015 Aug 17. PMID:26283768

- Development of a Multiple Loci Variable Number of Tandem Repeats Analysis (MLVA) to Unravel the Intra-Pathovar Structure of Pseudomonas syringae pv. actinidiae Populations Worldwide. Ciarroni S, Gallipoli L, Taratufolo MC, Butler MI, Poulter RT, Pourcel C, Vergnaud G, Balestra GM, Mazzaglia A. PLoS One. 2015 Aug 11 ;10(8):e0135310. doi : 10.1371/journal.pone.0135310. eCollection 2015. PMID : 26262683

The universal tree of life : an update. Forterre P. Front Microbiol. 2015 Jul 21 ;6:717. doi : 10.3389/fmicb.2015.00717. eCollection 2015. Review. PMID : 26257711

- A Pyranose-2-Phosphate Motif Is Responsible for Both Antibiotic Import and Quorum-Sensing Regulation in Agrobacterium tumefaciens. El Sahili A, Li SZ, Lang J, Virus C, Planamente S, Ahmar M, Guimaraes BG, Aumont-Nicaise M, Vigouroux A, Soulère L, Reader J, Queneau Y, Faure D, Moréra S. PLoS Pathog. 2015 Aug 5 ;11(8):e1005071. doi : 10.1371/journal.ppat.1005071. eCollection 2015 Aug. PMID:26244338

- Analysis of 51 cyclodipeptide synthases reveals the basis for substrate specificity. Jacques IB, Moutiez M, Witwinowski J, Darbon E, Martel C, Seguin J, Favry E, Thai R, Lecoq A, Dubois S, Pernodet JL, Gondry M, Belin P. Nat Chem Biol. 2015 Sep ;11(9):721-7. doi : 10.1038/nchembio.1868. Epub 2015 Aug 3. PMID:26236937

- Genetic diversity and molecular epidemiology of multidrug-resistant Mycobacterium tuberculosis in Minas Gerais State, Brazil. Dantas NG, Suffys PN, Carvalho Wda S, Gomes HM, de Almeida IN, de Assis LJ, Augusto CJ, Gomgnimbou MK, Refregier G, Sola C, de Miranda SS. BMC Infect Dis. 2015 Aug 1 ;15:306. doi : 10.1186/s12879-015-1057-y. PMID:26231661

- Comparative genomics reveals conserved positioning of essential genomic clusters in highly rearranged Thermococcales chromosomes. Cossu M, Da Cunha V, Toffano-Nioche C, Forterre P, Oberto J. Biochimie. 2015 Nov ;118:313-21. doi : 10.1016/j.biochi.2015.07.008. Epub 2015 Jul 10. PMID : 26166067

- Structure activity characterization of Bordetella petrii lipid A, from environment to human isolates. Basheer SM, Bouchez V, Novikov A, Augusto LA, Guiso N, Caroff M. Biochimie. 2015 Jul 8. pii : S0300-9084(15)00214-X. doi : 10.1016/j.biochi.2015.07.006. [Epub ahead of print] PMID : 26164553

- Environmental microbiology reveals the Earth secret life. Faure D, Bonin P, Duran R. Environ Sci Pollut Res Int. 2015 Sep ;22(18):13573-6. doi : 10.1007/s11356-015-4968-7. Epub 2015 Jul 11. No abstract available. PMID : 26162441

- Characterization of a Clone of Mycobacterium tuberculosis Clinical Isolates with Mutations in KatG (A110V), EthA (Q269STOP), and the inhA Promoter (-15C→T). Brossier F, Sola C, Bernard C, Jarlier V, Veziris N, Sougakoff W. J Clin Microbiol. 2015 Sep ;53(9):3104. doi : 10.1128/JCM.01537-15. Epub 2015 Jul 8. No abstract available. PMID : 26157154

- Genomics and Machine Learning for Taxonomy Consensus : The Mycobacterium tuberculosis Complex Paradigm. Azé J, Sola C, Zhang J, Lafosse-Marin F, Yasmin M, Siddiqui R, Kremer K, van Soolingen D, Refrégier G. PLoS One. 2015 Jul 8 ;10(7):e0130912. doi : 10.1371/journal.pone.0130912. eCollection 2015. PMID : 26154264

- Outcomes of Preterm Neonates Transferred Between Tertiary Perinatal Centers. Longhini F, Jourdain G, Ammar F, Mokthari M, Boithias C, Romain O, Letamendia E, Tissieres P, Chabernaud JL, De Luca D. Pediatr Crit Care Med. 2015 Oct ;16(8):733-8. doi : 10.1097/PCC.0000000000000482. PMID : 26132742

- Reversible Oxidation of a Conserved Methionine in the Nuclear Export Sequence Determines Subcellular Distribution and Activity of the Fungal Nitrate Regulator NirA. Gallmetzer A, Silvestrini L, Schinko T, Gesslbauer B, Hortschansky P, Dattenböck C, Muro-Pastor MI, Kungl A, Brakhage AA, Scazzocchio C, Strauss J. PLoS Genet. 2015 Jul 1 ;11(7):e1005297. doi : 10.1371/journal.pgen.1005297. eCollection 2015 Jul. PMID : 26132230

- Antibiotic Resistance Prevalence in Routine Bloodstream Isolates from Children’s Hospitals Varies Substantially from Adult Surveillance Data in Europe}.Bielicki JA, Lundin R, Sharland M ; ARPEC Project.Pediatr Infect Dis J 2015 Jul ;34(7):734-41. doi : 10.1097/INF.0000000000000652. PMID:25607829

-  Investigation of a Large Collection of Pseudomonas aeruginosa Bacteriophages Collected from a Single Environmental Source in Abidjan, Côte d’Ivoire. Essoh C, Latino L, Midoux C, Blouin Y, Loukou G, Nguetta SP, Lathro S, Cablanmian A, Kouassi AK, Vergnaud G, Pourcel C. PLoS One. 2015 Jun 26 ;10(6):e0130548. doi : 10.1371/journal.pone.0130548. eCollection 2015. PMID : 26115051

- Bradyrhizobium BclA Is a Peptide Transporter Required for Bacterial Differentiation in Symbiosis with Aeschynomene Legumes. Guefrachi I, Pierre O, Timchenko T, Alunni B, Barrière Q, Czernic P, Villaécija-Aguilar JA, Verly C, Bourge M, Fardoux J, Mars M, Kondorosi E, Giraud E, Mergaert P. Mol Plant Microbe Interact. 2015 Nov ;28(11):1155-66. doi : 10.1094/MPMI-04-15-0094-R. Epub 2015 Oct 2.PMID : 26106901

- Tuberculosis case detection in Nigeria, the unfinished agenda. Obasanya J, Abdurrahman ST, Oladimeji O, Lawson L, Dacombe R, Chukwueme N, Abiola T, Mustapha G, Sola C, Dominguez J, Cuevas LE. Trop Med Int Health. 2015 Oct ;20(10):1396-402. doi : 10.1111/tmi.12558. Epub 2015 Jul 15. PMID : 26084031

- Genome Sequence of the Potato Plant Pathogen Dickeya dianthicola Strain RNS04.9. Raoul des Essarts Y, Mondy S, Hélias V, Faure D. Genome Announc. 2015 Jun 4 ;3(3). pii : e00581-15. doi : 10.1128/genomeA.00581-15. PMID : 26044429

- Molecular Analysis of the embCAB Locus and embR Gene Involved in Ethambutol Resistance in Clinical Isolates of Mycobacterium tuberculosis in France. Brossier F, Sougakoff W, Bernard C, Petrou M, Adeyema K, Pham A, Amy de la Breteque D, Vallet M, Jarlier V, Sola C, Veziris N. Antimicrob Agents Chemother. 2015 Aug ;59(8):4800-8. doi : 10.1128/AAC.00150-15. Epub 2015 Jun 1.PMID:26033726

- Role of the Bacterial BacA ABC-Transporter in Chronic Infection of Nodule Cells by Rhizobium Bacteria. Guefrachi I, Verly C, Kondorosi E, Alunni B and MergaertP. Biological Nitrogen Fixation (ed F. J. de Bruijn). 2015 Published Online : 14 JUL 2015. doi : 10.1002/9781119053095.ch31

- Minos as a novel Tc1/mariner-type transposable element for functional genomic analysis in Aspergillus nidulans. Evangelinos M, Anagnostopoulos G, Karvela-Kalogeraki I, Stathopoulou PM, Scazzocchio C, Diallinas G. Fungal Genet Biol. 2015 Aug ;81:1-11. doi : 10.1016/j.fgb.2015.05.007. Epub 2015 May 25. PMID : 26021704

- 5’-Methylene-triazole-substituted-aminoribosyl uridines as MraY inhibitors : synthesis, biological evaluation and molecular modeling. Fer MJ, Bouhss A, Patrão M, Le Corre L, Pietrancosta N, Amoroso A, Joris B, Mengin-Lecreulx D, Calvet-Vitale S, Gravier-Pelletier C. Org Biomol Chem. 2015 Jul 14 ;13(26):7193-222. doi : 10.1039/c5ob00707k. Epub 2015 May 26. PMID:26008868

- Tuberculosis in evolution. Pálfi G, Dutour O, Perrin P, Sola C, Zink A. Tuberculosis (Edinb). 2015 Jun ;95 Suppl 1:S1-3. doi : 10.1016/ Epub 2015 Apr 18. No abstract available. PMID:25981736

- High-Throughput CRISPR Typing of Mycobacterium tuberculosis Complex and Salmonella enterica Serotype Typhimurium. Sola C, Abadia E, Le Hello S, Weill FX. Methods Mol Biol. 2015 ;1311:91-109. doi : 10.1007/978-1-4939-2687-9_6. PMID:25981468

- Phosphate Homeostasis in Conditions of Phosphate Proficiency and Limitation in the Wild Type and the phoP Mutant of Streptomyces lividans. Smirnov A, Esnault C, Prigent M, Holland IB, Virolle MJ. PLoS One. 2015 May 15 ;10(5):e0126221. doi : 10.1371/journal.pone.0126221. eCollection 2015.PMID:25978423

- Indications and Effects of Plasma Transfusions in Critically Ill Children.Karam O, Demaret P, Shefler A, Leteurtre S, Spinella PC, Stanworth SJ, Tucci M ; Canadian Critical Care Trials Group (CCCTG) ; Pediatric Acute Lung Injury and Sepsis Investigators (PALISI) ; BloodNet ; PlasmaTV Investigators.Am J Respir Crit Care Med. 2015 Jun 15 ;191(12):1395-402. doi.10.1164/rccm.201503-0450OC.PMID:25859890

- A novel multiple locus variable number of tandem repeat (VNTR) analysis (MLVA) method for Propionibacterium acnes. Hauck Y, Soler C, Gérôme P, Vong R, Macnab C, Appere G, Vergnaud G, Pourcel C. Infect Genet Evol. 2015 Jul ;33:233-41. doi : 10.1016/j.meegid.2015.05.009. Epub 2015 May 9.PMID:25965840

- An abyssal mobilome : viruses, plasmids and vesicles from deep-sea hydrothermal vents. Lossouarn J, Dupont S, Gorlas A, Mercier C, Bienvenu N, Marguet E, Forterre P, Geslin C. Res Microbiol. 2015 Apr 22. pii : S0923-2508(15)00063-7. doi : 10.1016/j.resmic.2015.04.001. [Epub ahead of print] PMID : 25911507

- In Vitro and In Vivo Analysis of the Gram-Negative Bacteria-Derived Riboflavin Precursor Derivatives Activating Mouse MAIT Cells. Soudais C, Samassa F, Sarkis M, Le Bourhis L, Bessoles S, Blanot D, Hervé M, Schmidt F, Mengin-Lecreulx D, Lantz O. J Immunol. 2015 May 15 ;194(10):4641-9. doi : 10.4049/jimmunol.1403224. Epub 2015 Apr 13. PMID : 25870247

- Dectin-1 activation unlocks IL12A expression and reveals the TH1 potency of neonatal dendritic cells. Lemoine S, Jaron B, Tabka S, Ettreiki C, Deriaud E, Zhivaki D, Le Ray C, Launay O, Majlessi L, Tissieres P, Leclerc C, Lo-Man R. J Allergy Clin Immunol. 2015 Nov ;136(5):1355-1368.e15. doi : 10.1016/j.jaci.2015.02.030. Epub 2015 Apr 10. PMID:25865351

- Tuberculosis in Late Neolithic-Early Copper Age human skeletal remains from Hungary. Pósa A, Maixner F, Mende BG, Köhler K, Osztás A, Sola C, Dutour O, Masson M, Molnár E, Pálfi G, Zink A. Tuberculosis (Edinb). 2015 Jun ;95 Suppl 1:S18-22. doi : 10.1016/ Epub 2015 Feb 13. PMID : 25857937

- Furan-based benzene mono- and dicarboxylic acid derivatives as multiple inhibitors of the bacterial Mur ligases (MurC-MurF) : experimental and computational characterization. Perdih A, Hrast M, Pureber K, Barreteau H, Grdadolnik SG, Kocjan D, Gobec S, Solmajer T, Wolber G. J Comput Aided Mol Des. 2015 Jun ;29(6):541-60. doi : 10.1007/s10822-015-9843-6. Epub 2015 Apr 8. PMID:25851408

- Diaminopimelic Acid Amidation in Corynebacteriales : NEW INSIGHTS INTO THE ROLE OF LtsA IN PEPTIDOGLYCAN MODIFICATION. Levefaudes M, Patin D, de Sousa-d’Auria C, Chami M, Blanot D, Hervé M, Arthur M, Houssin C, Mengin-Lecreulx D. J Biol Chem. 2015 May 22 ;290(21):13079-94. doi : 10.1074/jbc.M115.642843. Epub 2015 Apr 6. PMID : 25847251

- Diversification of Paralogous α-Isopropylmalate Synthases by Modulation of Feedback Control and Hetero-Oligomerization in Saccharomyces cerevisiae. López G, Quezada H, Duhne M, González J, Lezama M, El-Hafidi M, Colón M, Martínez de la Escalera X, Flores-Villegas MC, Scazzocchio C, DeLuna A, González A. Eukaryot Cell. 2015 Jun ;14(6):564-77. doi : 10.1128/EC.00033-15. Epub 2015 Apr 3. PMID : 25841022

- Tuberculosis infection in a late-medieval Hungarian population. Pósa A, Maixner F, Sola C, Bereczki Z, Molnár E, Masson M, Lovász G, Spekker O, Wicker E, Perrin P, Dutour O, Zink A, Pálfi G. Tuberculosis (Edinb). 2015 Jun ;95 Suppl 1:S60-4. doi : 0.1016/ Epub 2015 Feb 13. PMID : 25794469

- Evidence for tuberculosis in 18th/19th century slaves in Anse Sainte-Marguerite (Guadeloupe - French Western Indies). Lösch S, Kim MR, Dutour O, Courtaud P, Maixner F, Romon T, Sola C, Zink A. Tuberculosis (Edinb). 2015 Jun ;95 Suppl 1:S65-8. doi : 10.1016/ Epub 2015 Feb 12. PMID : 25754341

- Clustured regularly interspersed short palindromic repeats (CRISPR) genetic diversity studies as a mean to reconstruct the evolution of the Mycobacterium tuberculosis complex. Sola C. Tuberculosis (Edinb). 2015 Jun ;95 Suppl 1:S159-66. doi : 10.1016/ Epub 2015 Feb 14.PMID : 25748060

- A straightforward and reliable method for bacterial in planta transcriptomics : application to the Dickeya dadantii/Arabidopsis thaliana pathosystem. Chapelle E, Alunni B, Malfatti P, Solier L, Pédron J, Kraepiel Y, Van Gijsegem F. Plant J. 2015 Apr ;82(2):352-62. doi : 10.1111/tpj.12812. PMID : 25740271

- Next-generation sequencing as a powerful motor for advances in the biological and environmental sciences. Faure D, Joly D. Genetica. 2015 Apr ;143(2):129-32. doi : 10.1007/s10709-015-9831-8. Epub 2015 Mar 4. PMID:25736916

- Bacteroid development in legume nodules : evolution of sacrificial victims. Ábrahám, E., P. Mergaert, A. Kereszt, A. & E. Kondorosi (2015). In : "Biological Nitrogen Fixation”, F.J. de Bruijn (ed.). Wiley-Blackwell, pp. 669–681. DOI : 10.1002/9781119053095.ch67 [ISBN : 9781118637043 ; eISBN : 9781119053095].

- Crystal structures of the Gon7/Pcc1 and Bud32/Cgi121 complexes provide a model for the complete yeast KEOPS complex. Zhang W, Collinet B, Graille M, Daugeron MC, Lazar N, Libri D, Durand D, van Tilbeurgh H. Nucleic Acids Res. 2015 Mar 31 ;43(6):3358-72. doi : 10.1093/nar/gkv155. Epub 2015 Mar 3. PMID:25735745

- Origin, diversification and substrate specificity in the family of NCS1/FUR transporters. Krypotou E, Evangelidis T, Bobonis J, Pittis AA, Gabaldón T, Scazzocchio C, Mikros E, Diallinas G. Mol Microbiol. 2015 Jun ;96(5):927-50. doi : 10.1111/mmi.12982. Epub 2015 Apr 7. PMID : 25712422

- Core genome and plasmidome of the quorum-quenching bacterium Rhodococcus erythropolis. Kwasiborski A, Mondy S, Chong TM, Chan KG, Beury-Cirou A, Faure D. Genetica. 2015 Apr ;143(2):253-61. doi : 10.1007/s10709-015-9827-4. Epub 2015 Feb 13. PMID : 25676013

- Single-stranded DNA viruses employ a variety of mechanisms for integration into host genomes. Krupovic M, Forterre P. Ann N Y Acad Sci. 2015 Apr ;1341:41-53. doi : 10.1111/nyas.12675. Epub 2015 Feb 11. Review. PMID:25675979

- Functional characterization of NAT/NCS2 proteins of Aspergillus brasiliensis reveals a genuine xanthine-uric acid transporter and an intrinsically misfolded polypeptide. Krypotou E, Scazzocchio C, Diallinas G. Fungal Genet Biol. 2015 Feb ;75:56-63. doi : 10.1016/j.fgb.2015.01.009. Epub 2015 Jan 29. PMID:25639910

- Draft Genome Sequences of Pseudomonas fluorescens Strains PA4C2 and PA3G8 and Pseudomonas putida PA14H7, Three Biocontrol Bacteria against Dickeya Phytopathogens. Cigna J, Raoul des Essarts Y, Mondy S, Hélias V, Beury-Cirou A, Faure D. Genome Announc. 2015 Jan 29 ;3(1). pii : e01503-14. doi : 10.1128/genomeA.01503-14. PMID : 25635023

- Draft Genome Sequences of the Three Pectobacterium-Antagonistic Bacteria Pseudomonas brassicacearum PP1-210F and PA1G7 and Bacillus simplex BA2H3. Khayi S, Raoul des Essarts Y, Mondy S, Moumni M, Hélias V, Beury-Cirou A, Faure D. Genome Announc. 2015 Jan 29 ;3(1). pii : e01497-14. doi : 10.1128/genomeA.01497-14. PMID:25635020

- Alnus peptides modify membrane porosity and induce the release of nitrogen-rich metabolites from nitrogen-fixing Frankia. Carro L, Pujic P, Alloisio N, Fournier P, Boubakri H, Hay AE, Poly F, François P, Hocher V, Mergaert P, Balmand S, Rey M, Heddi A, Normand P. ISME J. 2015 Aug ;9(8):1723-33. doi : 10.1038/ismej.2014.257. Epub 2015 Jan 20. PMID:25603394

- The challenge of studying TiO2 nanoparticle bioaccumulation at environmental concentrations : crucial use of a stable isotope tracer. Bourgeault A, Cousin C, Geertsen V, Cassier-Chauvat C, Chauvat F, Durupthy O, Chanéac C, Spalla O. Environ Sci Technol. 2015 Feb 17 ;49(4):2451-9. doi : 10.1021/es504638f. Epub 2015 Jan 28. PMID:25587677

- The phage tail tape measure protein, an inner membrane protein and a periplasmic chaperone play connected roles in the genome injection process of E. coli phage HK97. Cumby N, Reimer K, Mengin-Lecreulx D, Davidson AR, Maxwell KL. Mol Microbiol. 2015 May ;96(3):437-47. doi : 10.1111/mmi.12918. Epub 2015 Jan 30. PMID : 25532427

- Desulfovibrio desulfuricans isolates from the gut of a single individual : structural and biological lipid A characterization. Zhang-Sun W, Augusto LA, Zhao L, Caroff M.
FEBS Lett. 2015 Jan 2 ;589(1):165-71. doi : 10.1016/j.febslet.2014.11.042. Epub 2014 Dec 3. PMID : 25479086

- Oxygen-dependent copper toxicity : targets in the chlorophyll biosynthesis pathway identified in the copper efflux ATPase CopA deficient mutant. Liotenberg S, Steunou AS, Durand A, Bourbon ML, Bollivar D, Hansson M, Astier C, Ouchane S. Environ Microbiol. 2015 Jun ;17(6):1963-76. doi : 10.1111/1462-2920.12733. Epub 2015 Feb 3. PMID:25471928

- Residues located on membrane-embedded flexible loops are essential for the second step of the apolipoprotein N-acyltransferase reaction. Gélis-Jeanvoine S, Lory S, Oberto J, Buddelmeijer N. Mol Microbiol. 2015 Feb ;95(4):692-705. doi : 10.1111/mmi.12897. Epub 2015 Jan 16. PMID : 25471278

-  Operator recognition by the ROK transcription factor family members, NagC and Mlc. Bréchemier-Baey D, Domínguez-Ramírez L, Oberto J, Plumbridge J. Nucleic Acids Res. 2015 Jan ;43(1):361-72. doi : 10.1093/nar/gku1265. Epub 2014 Dec 1. PMID:25452338

- Synergistic template-free synthesis of dsDNA by Thermococcus nautili primase PolpTN2, DNA polymerase PolB, and pTN2 helicase. Béguin P, Gill S, Charpin N, Forterre P. Extremophiles. 2015 Jan ;19(1):69-76. doi : 10.1007/s00792-014-0706-1. Epub 2014 Nov 25. PMID:25420601

-  Purification and biochemical characterisation of GlmU from Yersinia pestis. Patin D, Bayliss M, Mengin-Lecreulx D, Oyston P, Blanot D. Arch Microbiol. 2015 Apr ;197(3):371-8. doi : 10.1007/s00203-014-1065-0. Epub 2014 Nov 23. PMID:25417006

- Natural combinatorial biosynthesis involving two clusters for the synthesis of three pyrrolamides in Streptomyces netropsis. Vingadassalon A, Lorieux F, Juguet M, Le Goff G, Gerbaud C, Pernodet JL, Lautru S. ACS Chem Biol. 2015 Feb 20 ;10(2):601-10. doi : 10.1021/cb500652n. Epub 2014 Dec 4. PMID : 25415678

-  Development of a multiple-locus variable-number tandem-repeat typing scheme for genetic fingerprinting of Burkholderia cenocepacia and application to nationwide epidemiological analysis. Segonds C, Thouverez M, Barthe A, Bossuet-Greif N, Tisseyre L, Plésiat P, Vergnaud G, Chabanon G, Pourcel C. J Clin Microbiol. 2015 Feb ;53(2):398-409. doi : 10.1128/JCM.02473-14. Epub 2014 Nov 19. PMID : 25411181

- Structural and biochemical characterization of the β-N-acetylglucosaminidase from Thermotoga maritima : toward rationalization of mechanistic knowledge in the GH73 family. Lipski A, Hervé M, Lombard V, Nurizzo D, Mengin-Lecreulx D, Bourne Y, Vincent F. Glycobiology. 2015 Mar ;25(3):319-30. doi : 10.1093/glycob/cwu113. Epub 2014 Oct 24. PMID:25344445

- Membrane vesicles in natural environments : a major challenge in viral ecology. Soler N, Krupovic M, Marguet E, Forterre P. ISME J. 2015 Mar 17 ;9(4):793-6. doi : 10.1038/ismej.2014.184. No abstract available. PMID:25314322

- Genomic overview of the phytopathogen Pectobacterium wasabiae strain RNS 08.42.1A suggests horizontal acquisition of quorum-sensing genes. Khayi S, Raoul des Essarts Y, Quêtu-Laurent A, Moumni M, Hélias V, Faure D. Genetica. 2015 Apr ;143(2):241-52. doi : 10.1007/s10709-014-9793-2. Epub 2014 Oct 9. PMID:25297844

- First proteomic study of S-glutathionylation in cyanobacteria. Chardonnet S, Sakr S, Cassier-Chauvat C, Le Maréchal P, Chauvat F, Lemaire SD, Decottignies P. J Proteome Res. 2015 Jan 2 ;14(1):59-71. doi : 10.1021/pr500625a. Epub 2014 Sep 19. PMID:25208982

- Mobility and temperature resistance of trehalose mycolates as key characteristics of the outer membrane of Mycobacterium tuberculosis. Migliardo F, Salmeron C, Bayan N. J Biomol Struct Dyn. 2015 ;33(2):447-59. doi : 10.1080/07391102.2014.887032. Epub 2014 Mar 6. PMID:24601825

- Responses to oxidative and heavy metal stresses in cyanobacteria : recent advances. Cassier-Chauvat C, Chauvat F. Int J Mol Sci. 2014 Dec 31 ;16(1):871-86. doi : 10.3390/ijms16010871. Review. PMID:25561236

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