Zangarelli, Coralie, Olivier Arnaiz, Mickael Bourge, Kevin Gorrichon, Yan Jaszczyszyn, Nathalie Mathy, Loic Escoriza, Mireille Betermier, and Vinciane Regnier. 2022. “Developmental Timing of Programmed DNA Elimination in Paramecium Tetraurelia Recapitulates Germline Transposon Evolutionary Dynamics.” Genome Research, November, gr.277027.122.
Banerjee, Payel, Paul Joly, Luc Jouneau, Yan Jaszczyszyn, Mickaël Bourge, Pierre Affaticati, Jean-Pierre Levraud, Pierre Boudinot, and Jean-Stéphane Joly. 2022. “Molecular and Cellular Analysis of the Repair of Zebrafish Optic Tectum Meninges Following Laser Injury.” Cells 11 (13): 2016.
Piet, Quentin, Gaetan Droc, William Marande, Gautier Sarah, Stéphanie Bocs, Christophe Klopp, Mickael Bourge, et al. 2022. “A Chromosome-Level, Haplotype-Phased Vanilla Planifolia Genome Highlights the Challenge of Partial Endoreplication for Accurate Whole-Genome Assembly.” Plant Communications, May, 100330.
Bogunić, Faruk, Sonja Siljak-Yakovlev, Irma Mahmutović-Dizdarević, Alma Hajrudinović-Bogunić, Mickaël Bourge, Spencer C. Brown, and Edina Muratović. 2021. “Genome Size, Cytotype Diversity and Reproductive Mode Variation of Cotoneaster Integerrimus (Rosaceae) from the Balkans.” Plants 10 (12): 2798.
Nicoud, Quentin, Quentin Barrière, Nicolas Busset, Sara Dendene, Dmitrii Travin, Mickaël Bourge, Romain Le Bars, et al. 2021. “Sinorhizobium Meliloti Functions Required for Resistance to Antimicrobial NCR Peptides and Bacteroid Differentiation.” MBio 12 (4): e0089521.
Nicoud, Quentin, Florian Lamouche, Anaïs Chaumeret, Thierry Balliau, Romain Le Bars, Mickaël Bourge, Fabienne Pierre, et al. 2021. “Bradyrhizobium Diazoefficiens USDA110 Nodulation of Aeschynomene Afraspera Is Associated with Atypical Terminal Bacteroid Differentiation and Suboptimal Symbiotic Efficiency.” MSystems 6 (3): e01237-20.
Quilbé, Johan, Léo Lamy, Laurent Brottier, Philippe Leleux, Joël Fardoux, Ronan Rivallan, Thomas Benichou, et al. 2021. “Genetics of Nodulation in Aeschynomene Evenia Uncovers Mechanisms of the Rhizobium-Legume Symbiosis.” Nature Communications 12 (1): 829.
Scalvenzi, Thibault, Isabelle Clavereau, Mickaël Bourge, and Nicolas Pollet. 2021. “Gut microbial ecology of Xenopus tadpoles across life stages.” Peer Community Journal 1.
Siljak-Yakovlev, Sonja, Françoise Lamy, Najat Takvorian, Nicolas Valentin, Valérie Gouesbet, Françoise Hennion, and Thierry Robert. 2020. “Genome Size and Chromosome Number of Ten Plant Species from Kerguelen Islands.” Polar Biology 43 (12): 1985–99.
Farhat, Perla, Sonja Siljak-Yakovlev, Nicolas Valentin, Carlos Fabregat, Silvia Lopez-Udias, Carlos Salazar-Mendias, Joaquín Altarejos, and Robert P. Adams. 2020. “Gene Flow between Diploid and Tetraploid Junipers - Two Contrasting Evolutionary Pathways in Two Juniperus Populations.” BMC Evolutionary Biology 20 (November).
Sabeti Azad, Mahnaz, Maho Okuda, Mélina Cyrenne, Mickael Bourge, Marie-Pierre Heck, Satoko Yoshizawa, and Dominique Fourmy. 2020. “Fluorescent Aminoglycoside Antibiotics and Methods for Accurately Monitoring Uptake by Bacteria.” ACS Infectious Diseases 6 (5): 1008–17.
Siljak-Yakovlev, Sonja, Edina Muratovic, Faruk Bogunic, Nedad Bagic, Marija E. Solic, Aldin Boskailo, Michael Bourge, et al. 2020. “Genome Size of Balkan Flora: A Database (GeSDaBaF) and C-Values for 51 Taxa of Which 46 Are Novel.” Plant Systematics and Evolution 306 (2): UNSP 40.
Bourge, Mickaël, and Béatrice Satiat-Jeunemaître. 2020. “Chapitre 20 - Les applications en biologie végétale : contraintes, succès, espoirs.” In La cytométrie en flux, edited by J-F. Mayol, C. Laplace-Builhé, and C.D. Muller, 2e ed, 341–54. Tec & Doc. Paris: Lavoisier.
Paalme, Viiu, Airi Rump, Kati Mädo, Marina Teras, Birgit Truumees, Helen Aitai, Kristel Ratas, et al. 2019. “Human Peripheral Blood Eosinophils Express High Levels of the Purinergic Receptor P2X4.” Frontiers in Immunology 10: 2074.
Srisuwan, S., D. Sihachakr, J. Martín, J. Vallès, A. Ressayre, S. C. Brown, and S. Siljak‐Yakovlev. 2019. “Change in Nuclear DNA Content and Pollen Size with Polyploidisation in the Sweet Potato (Ipomoea Batatas, Convolvulaceae) Complex.” Plant Biology 21 (2): 237–47.
Bordet, Elise, Maxence Frétaud, Elisa Crisci, Edwige Bouguyon, Stéphane Rault, Jérémy Pezant, Alexis Pleau, et al. 2019. “Macrophage-B Cell Interactions in the Inverted Porcine Lymph Node and Their Response to Porcine Reproductive and Respiratory Syndrome Virus.” Frontiers in Immunology 10: 953.
Brottier, Laurent, Clémence Chaintreuil, Paul Simion, Céline Scornavacca, Ronan Rivallan, Pierre Mournet, Lionel Moulin, et al. 2018. “A Phylogenetic Framework of the Legume Genus Aeschynomene for Comparative Genetic Analysis of the Nod-Dependent and Nod-Independent Symbioses.” BMC Plant Biology 18 (1): 333.
Raffoux, Xavier, Mickael Bourge, Fabrice Dumas, Olivier C. Martin, and Matthieu Falque. 2018. “Role of Cis, Trans, and Inbreeding Effects on Meiotic Recombination in Saccharomyces Cerevisiae.” Genetics 210 (4): 1213–26.
Bordet, Elise, Fany Blanc, Mathieu Tiret, Elisa Crisci, Edwige Bouguyon, Patricia Renson, Pauline Maisonnasse, et al. 2018. “Porcine Reproductive and Respiratory Syndrome Virus Type 1.3 Lena Triggers Conventional Dendritic Cells 1 Activation and T Helper 1 Immune Response Without Infecting Dendritic Cells.” Frontiers in Immunology 9 (October): 2299.
Malli, Sophia, Christian Bories, Mickael Bourge, Philippe M. Loiseau, and Kawthar Bouchemal. 2018. “Surface-Dependent Endocytosis of Poly(Isobutylcyanoacrylate) Nanoparticles by Trichomonas Vaginalis.” International Journal of Pharmaceutics 548 (1): 276–87.
Avin-Wittenberg, Tamar, Frantisek Baluška, Peter V. Bozhkov, Pernilla H. Elander, Alisdair R. Fernie, Gad Galili, Ammar Hassan, et al. 2018. “Corrigendum: Autophagy-Related Approaches for Improving Nutrient Use Efficiency and Crop Yield Protection.” Journal of Experimental Botany 69 (12): 3173.
Avin-Wittenberg, Tamar, Frantisek Baluška, Peter V Bozhkov, Pernilla H Elander, Alisdair R Fernie, Gad Galili, Ammar Hassan, et al. 2018. “Autophagy-Related Approaches for Improving Nutrient Use Efficiency and Crop Yield Protection.” Edited by Chris Hawes. Journal of Experimental Botany 69 (6): 1335–53.
Marion, Jessica, Romain Le Bars, Laetitia Besse, Henri Batoko, and Béatrice Satiat-Jeunemaitre. 2018. “Multiscale and Multimodal Approaches to Study Autophagy in Model Plants.” Cells 7 (1): 5.
Chaintreuil, Clémence, Xavier Perrier, Guillaume Martin, Joël Fardoux, Gwilym P. Lewis, Laurent Brottier, Ronan Rivallan, et al. 2018. “Naturally Occurring Variations in the Nod-Independent Model Legume Aeschynomene Evenia and Relatives: A Resource for Nodulation Genetics.” BMC Plant Biology 18 (1).
Raffoux, Xavier, Mickael Bourge, Fabrice Dumas, Olivier C. Martin, and Matthieu Falque. 2018. “High-Throughput Measurement of Recombination Rates and Genetic Interference in Saccharomyces Cerevisiae.” Yeast (Chichester, England) 35 (6): 431–42.
Pirrello, Julien, Cynthia Deluche, Nathalie Frangne, Frédéric Gévaudant, Elie Maza, Anis Djari, Mickaël Bourge, et al. 2018. “Transcriptome Profiling of Sorted Endoreduplicated Nuclei from Tomato Fruits: How the Global Shift in Expression Ascribed to DNA Ploidy Influences RNA-Seq Data Normalization and Interpretation.” The Plant Journal: For Cell and Molecular Biology 93 (2): 387–98.
Brown, Spencer C., Mickaël Bourge, Nicolas Maunoury, Maurice Wong, Michele Wolfe Bianchi, Sandra Lepers-Andrzejewski, Pascale Besse, Sonja Siljak-Yakovlev, Michel Dron, and Béatrice Satiat-Jeunemaître. 2017. “DNA Remodeling by Strict Partial Endoreplication in Orchids, an Original Process in the Plant Kingdom.” Genome Biology and Evolution 9 (4): 1051–71.
Pedroza-García, José-Antonio, Christelle Mazubert, Ivan del Olmo, Mickael Bourge, Séverine Domenichini, Rémi Bounon, Zakia Tariq, et al. 2017. “Function of the Plant DNA Polymerase Epsilon in Replicative Stress Sensing, a Genetic Analysis.” Plant Physiology 173 (3): 1735–49.
Dambroise, Emilie, Matthieu Simion, Thomas Bourquard, Stéphanie Bouffard, Barbara Rizzi, Yan Jaszczyszyn, Mickaël Bourge, et al. 2017. “Postembryonic Fish Brain Proliferation Zones Exhibit Neuroepithelial-Type Gene Expression Profile: Features of Neuroepithelial Cells in Fish.” STEM CELLS.
Chaintreuil, Clémence, Djamel Gully, Catherine Hervouet, Panlada Tittabutr, Herizo Randriambanona, Spencer C. Brown, Gwilym P. Lewis, et al. 2016. “The Evolutionary Dynamics of Ancient and Recent Polyploidy in the African Semiaquatic Species of the Legume Genus Aeschynomene.” The New Phytologist 211 (3): 1077–91.
Pedroza-Garcia, José Antonio, Séverine Domenichini, Christelle Mazubert, Mickael Bourge, Charles White, Elodie Hudik, Rémi Bounon, et al. 2016. “Role of the Polymerase ϵ Sub-Unit DPB2 in DNA Replication, Cell Cycle Regulation and DNA Damage Response in Arabidopsis.” Nucleic Acids Research, May, gkw449.
Maisonnasse, P, E Bouguyon, G Piton, A Ezquerra, C Urien, C Deloizy, M Bourge, et al. 2016. “The Respiratory DC/Macrophage Network at Steady-State and upon Influenza Infection in the Swine Biomedical Model.” Mucosal Immunology 9 (4): 835–49.
Benincasa, Monica, Quentin Barrière, Giulia Runti, Olivier Pierre, Mick Bourge, Marco Scocchi, and Peter Mergaert. 2016. “Single Cell Flow Cytometry Assay for Peptide Uptake by Bacteria.” BIO-PROTOCOL 6 (23).
Guefrachi, Ibtissem, Olivier Pierre, Tatiana Timchenko, Benoît Alunni, Quentin Barrière, Pierre Czernic, José-Antonio Villaécija-Aguilar, et al. 2015. “Bradyrhizobium BclA Is a Peptide Transporter Required for Bacterial Differentiation in Symbiosis with Aeschynomene Legumes.” Molecular Plant-Microbe Interactions: MPMI 28 (11): 1155–66.
Jégu, Teddy, Séverine Domenichini, Thomas Blein, Federico Ariel, Aurélie Christ, Soon-Kap Kim, Martin Crespi, et al. 2015. “A SWI/SNF Chromatin Remodelling Protein Controls Cytokinin Production through the Regulation of Chromatin Architecture.” Edited by Mohammed Bendahmane. PLOS ONE 10 (10): e0138276.
Hajrudinović, Alma, Sonja Siljak-Yakovlev, Spencer C. Brown, Fatima Pustahija, Mickael Bourge, Dalibor Ballian, and Faruk Bogunić. 2015. “When Sexual Meets Apomict: Genome Size, Ploidy Level and Reproductive Mode Variation of Sorbus Aria s.l. and S. Austriaca (Rosaceae) in Bosnia and Herzegovina.” Annals of Botany 116 (2): 301–12.
Vu Manh, Thien-Phong, Jamila Elhmouzi-Younes, Céline Urien, Suzana Ruscanu, Luc Jouneau, Mickaël Bourge, Marco Moroldo, et al. 2015. “Defining Mononuclear Phagocyte Subset Homology Across Several Distant Warm-Blooded Vertebrates Through Comparative Transcriptomics.” Frontiers in Immunology 6 (June).
Bourbousse, Clara, Imen Mestiri, Gerald Zabulon, Mickaël Bourge, Fabio Formiggini, Maria A. Koini, Spencer C. Brown, Paul Fransz, Chris Bowler, and Fredy Barneche. 2015. “Light Signaling Controls Nuclear Architecture Reorganization during Seedling Establishment.” Proceedings of the National Academy of Sciences 112 (21): E2836–44.
Bourge, Mickaël, Cécile Fort, Marie-Noëlle Soler, Béatrice Satiat-Jeunemaître, and Spencer C. Brown. 2015. “A Pulse-Chase Strategy Combining Click-EdU and Photoconvertible Fluorescent Reporter: Tracking Golgi Protein Dynamics during the Cell Cycle.” New Phytologist 205 (2): 938–50.

2014 - 2010


  1. Pirrello, J. et al. How fruit developmental biology makes use of flow cytometry approaches. Cytometry 85, 115–125 (2014).
  2. Marquet, F. et al. Pig Skin Includes Dendritic Cell Subsets Transcriptomically Related to Human CD1a and CD14 Dendritic Cells Presenting Different Migrating Behaviors and T Cell Activation Capacities. J Immunol 193, 5883–5893 (2014).
  3. Hudik, E. et al. Chloroplast Dysfunction Causes Multiple Defects in Cell Cycle Progression in the Arabidopsis crumpled leaf Mutant1[C][W]. Plant Physiol 166, 152–167 (2014).
  4. Ruscanu, S. et al. Dendritic Cell Subtypes from Lymph Nodes and Blood Show Contrasted Gene Expression Programs upon Bluetongue Virus Infection. J Virol 87, 9333–9343 (2013).
  5. Pustahija, F. et al. Small genomes dominate in plants growing on serpentine soils in West Balkans, an exhaustive study of 8 habitats covering 308 taxa. Plant Soil 373, 427–453 (2013).
  6. Pineau, B. et al. The Importance of Cardiolipin Synthase for Mitochondrial Ultrastructure, Respiratory Function, Plant Development, and Stress Responses in Arabidopsis. Plant Cell 25, 4195–4208 (2013).
  7. Jégu, T. et al. Multiple Functions of Kip-Related Protein5 Connect Endoreduplication and Cell Elongation[C][W]. Plant Physiol 161, 1694–1705 (2013).
  8. Dagher-Kharrat, M. B. et al. Nuclear DNA C-values for biodiversity screening: Case of the Lebanese flora. Plant Biosystems – An International Journal Dealing with all Aspects of Plant Biology 147, 1228–1237 (2013).
  9. Ruscanu, S. et al. The Double-Stranded RNA Bluetongue Virus Induces Type I Interferon in Plasmacytoid Dendritic Cells via a MYD88-Dependent TLR7/8-Independent Signaling Pathway. J Virol 86, 5817–5828 (2012).
  10. Razafinarivo, N. J. et al. Geographical gradients in the genome size variation of wild coffee trees (Coffea) native to Africa and Indian Ocean islands. Tree Genetics & Genomes 8, 1345–1358 (2012).
  11. Janski, N. et al. The GCP3-Interacting Proteins GIP1 and GIP2 Are Required for γ-Tubulin Complex Protein Localization, Spindle Integrity, and Chromosomal Stability[C][W]. Plant Cell 24, 1171–1187 (2012).
  12. Dufaÿ Wojcicki, A. et al. Hyaluronic acid-bearing lipoplexes: physico-chemical characterization and in vitro targeting of the CD44 receptor. J Control Release 162, 545–552 (2012).
  13. Domenichini, S. et al. Evidence for a Role of Arabidopsis CDT1 Proteins in Gametophyte Development and Maintenance of Genome Integrity[C][W]. Plant Cell 24, 2779–2791 (2012).
  14. Contreras, V. et al. Canine Recombinant Adenovirus Vector Induces an Immunogenicity-Related Gene Expression Profile in Skin-Migrated CD11b+ -Type DCs. PLoS One 7, (2012).
  15. Bourdon, M. et al. Evidence for karyoplasmic homeostasis during endoreduplication and a ploidy-dependent increase in gene transcription during tomato fruit growth. Development 139, 3817–3826 (2012).
  16. Perazza, D. et al. GeBP/GPL Transcription Factors Regulate a Subset of CPR5-Dependent Processes1[C][W]. Plant Physiol 157, 1232–1242 (2011).
  17. Aubert, A. et al. Sphingolipids involvement in plant endomembrane differentiation: the BY2 case. Plant J. 65, 958–971 (2011).
  18. Argout, X. et al. The genome of Theobroma cacao. Nat. Genet. 43, 101–108 (2011).
  19. Van de Velde, W. et al. Plant peptides govern terminal differentiation of bacteria in symbiosis. Science 327, 1122–1126 (2010).
  20. Grunwald, D. Cycle cellulaire et cytométrie en flux. (Tec et Doc, 2010).
  21. Bourge, M., Tlili, A., Dupré-Crochet, S., Nüβe, O. & Sulpice, J.-C. Amiloride derivatives modulate PS externalization in neutrophil-like PLB-985 cells. Biochemical Pharmacology 80, 1012–1020 (2010).
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