Conformation and segregation
of the bacterial chromosome

Publications

Anchimiuk, Anna, Virginia S. Lioy, Florian Patrick Bock, Anita Minnen, Frederic Boccard, and Stephan Gruber. 2021. “A Low Smc Flux Avoids Collisions and Facilitates Chromosome Organization in Bacillus Subtilis.” ELife 10 (August): e65467. https://doi.org/10.7554/eLife.65467.
Lioy, Virginia S., Ivan Junier, and Frédéric Boccard. 2021. “Multiscale Dynamic Structuring of Bacterial Chromosomes.” Annual Review of Microbiology, August. https://doi.org/10.1146/annurev-micro-033021-113232.
Lioy, Virginia, Jean-Noel Lorenzi, Soumaya Najah, Thibault Poinsignon, Herve Leh, Corinne Saulnier, Bertrand Aigle, et al. 2020. “Dynamics of the Compartmentalized Streptomyces Chromosome during Metabolic Differentiation.” BioRxiv, December, 2020.12.09.415976. https://doi.org/10.1101/2020.12.09.415976.
Lioy, Virginia S., Ivan Junier, Valentine Lagage, Isabelle Vallet, and Frédéric Boccard. 2020. “Distinct Activities of Bacterial Condensins for Chromosome Management in Pseudomonas Aeruginosa.” Cell Reports 33 (5): 108344. https://doi.org/10.1016/j.celrep.2020.108344.
Varoquaux, Nelle, Virginia S. Lioy, Frédéric Boccard, and Ivan Junier. 2020. “Computational Tools for the Multiscale Analysis of Hi-C Data in Bacterial Chromosomes.” Methods in Molecular Biology (Clifton, N.J.) 2301: 197–207. https://doi.org/10.1007/978-1-0716-1390-0_10.
Kretsch, Ashley M., Gina L. Morgan, Jillian Tyne, Emily Meyers, Isabelle Vallet-Gely, and Bo Li. 2018. “Discovery of (Dihydro)Pyrazine N-Oxides via Genome Mining in Pseudomonas.” Organic Letters 20 (16): 4791–95. https://doi.org/10.1021/acs.orglett.8b01944.
Lioy, Virginia S., Axel Cournac, Martial Marbouty, Stéphane Duigou, Julien Mozziconacci, Olivier Espéli, Frédéric Boccard, and Romain Koszul. 2018. “Multiscale Structuring of the E. Coli Chromosome by Nucleoid-Associated and Condensin Proteins.” Cell 172 (4): 771-783.e18. https://doi.org/10.1016/j.cell.2017.12.027.
Lioy, Virginia S., and Frédéric Boccard. 2018. “Conformational Studies of Bacterial Chromosomes by High-Throughput Sequencing Methods.” Methods in Enzymology 612: 25–45. https://doi.org/10.1016/bs.mie.2018.07.007.
Brézellec, Pierre, Marie-Agnès Petit, Sophie Pasek, Isabelle Vallet-Gely, Christophe Possoz, and Jean-Luc Ferat. 2017. “Domestication of Lambda Phage Genes into a Putative Third Type of Replicative Helicase Matchmaker.” Genome Biology and Evolution 9 (6): 1561–66. https://doi.org/10.1093/gbe/evx111.
Duigou, Stéphane, and Frédéric Boccard. 2017. “Long Range Chromosome Organization in Escherichia Coli: The Position of the Replication Origin Defines the Non-Structured Regions and the Right and Left Macrodomains.” PLoS Genetics 13 (5): e1006758. https://doi.org/10.1371/journal.pgen.1006758.
Brézellec, Pierre, Isabelle Vallet-Gely, Christophe Possoz, Sophie Quevillon-Cheruel, and Jean-Luc Ferat. 2016. “DciA Is an Ancestral Replicative Helicase Operator Essential for Bacterial Replication Initiation.” Nature Communications 7 (November): 13271. https://doi.org/10.1038/ncomms13271.
Lagage, Valentine, Frédéric Boccard, and Isabelle Vallet-Gely. 2016. “Regional Control of Chromosome Segregation in Pseudomonas Aeruginosa.” PLoS Genetics 12 (11): e1006428. https://doi.org/10.1371/journal.pgen.1006428.
Valens, Michèle, Axel Thiel, and Frédéric Boccard. 2016. “The MaoP/MaoS Site-Specific System Organizes the Ori Region of the E. Coli Chromosome into a Macrodomain.” PLoS Genetics 12 (9): e1006309. https://doi.org/10.1371/journal.pgen.1006309.
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