Integrated approaches
to ion transport

Mozhgani, Mahdi, Lia Ooi, Christelle Espagne, Sophie Filleur, and Izumi C. Mori. 2024. “Cytosolic Acidification and Oxidation Are the Toxic Mechanisms of SO2 in Arabidopsis Guard Cells.” Bioscience, Biotechnology, and Biochemistry, July, zbae092. https://doi.org/10.1093/bbb/zbae092.

González, Dubiel Alfonso, Vanesa Sánchez García de la Torre, Rolando Reyes Fernández, Louise Barreau, and Sylvain Merlot. 2024. “Divergent Roles of IREG/Ferroportin Transporters from the Nickel Hyperaccumulator Leucocroton Havanensis.” Physiologia Plantarum 176 (2): e14261. https://doi.org/10.1111/ppl.14261.

Audemar, Vassanti, Yannick Guerringue, Joni Frederick, Pauline Vinet, Isaty Melogno, Avin Babataheri, Valérie Legué, Sébastien Thomine, and Jean-Marie Frachisse. 2023. “Straining the Root on and off Triggers Local Calcium Signalling.” Proceedings. Biological Sciences 290 (2012): 20231462. https://doi.org/10.1098/rspb.2023.1462.

Messant, Marine, Umama Hani, Thaïs Hennebelle, Florence Guérard, Bertrand Gakière, Andrew Gall, Sébastien Thomine, and Anja Krieger-Liszkay. 2023. “Manganese Concentration Affects Chloroplast Structure and the Photosynthetic Apparatus in Marchantia Polymorpha.” Plant Physiology, February, kiad052. https://doi.org/10.1093/plphys/kiad052.

Hodin, Julie, Christof Lind, Anne Marmagne, Christelle Espagne, Michele Wolfe Bianchi, Alexis De Angeli, Fadi Abou-Choucha, et al. 2022. “Proton Exchange by the Vacuolar Nitrate Transporter CLCa Is Required for Plant Growth and Nitrogen Use Efficiency.” The Plant Cell, November, koac325. https://doi.org/10.1093/plcell/koac325.

Guichard, Marjorie, Sébastien Thomine, and Jean-Marie Frachisse. 2022. “Mechanotransduction in the Spotlight of Mechano-Sensitive Channels.” Current Opinion in Plant Biology 68 (August):102252. https://doi.org/10.1016/j.pbi.2022.102252.

Noureddine, Yara, Joffrey Mejias, Martine da Rocha, Sébastien Thomine, Michaël Quentin, Pierre Abad, Bruno Favery, and Stéphanie Jaubert-Possamai. 2022. “Copper MicroRNAs Modulate the Formation of Giant Feeding Cells Induced by the Root Knot Nematode Meloidogyne Incognita in Arabidopsis Thaliana.” New Phytologist n/a (n/a). https://doi.org/10.1111/nph.18362.

Gotty, Karine, Gael J. Kergoat, Pierre Jouannais, Vanessa Invernon, Sylvain Merlot, and Yohan Pillon. 2022. “Relict Lineages with Extreme Ecology and Physiology: Metal Hyperaccumulation on Ultramafic Substrates in New Caledonian Alseuosmineae (Asterales).” Plant Ecology & Diversity 0 (0): 1–16. https://doi.org/10.1080/17550874.2022.2093290.

Pottier, Mathieu, Van Anh Le Thi, Catherine Primard-Brisset, Jessica Marion, Michele Bianchi, Cindy Victor, Annabelle Déjardin, Gilles Pilate, and Sébastien Thomine. 2022. “Duplication of NRAMP3 Gene in Poplars Generated Two Homologous Transporters with Distinct Functions.” Molecular Biology and Evolution, June, msac129. https://doi.org/10.1093/molbev/msac129.

Fiorucci, Anne-Sophie, Olivier Michaud, Emanuel Schmid-Siegert, Martine Trevisan, Laure Allenbach Petrolati, Yetkin Çaka Ince, and Christian Fankhauser. 2022. “Shade Suppresses Wound-Induced Leaf Repositioning through a Mechanism Involving PHYTOCHROME KINASE SUBSTRATE (PKS) Genes.” PLOS Genetics 18 (5): e1010213. https://doi.org/10.1371/journal.pgen.1010213.

Assunção, Ana G L, Ismail Cakmak, Stephan Clemens, Manuel González-Guerrero, Adam Nawrocki, and Sébastien Thomine. 2022. “Micronutrient Homeostasis in Plants for More Sustainable Agriculture and Healthier Human Nutrition.” Journal of Experimental Botany, February, erac014. https://doi.org/10.1093/jxb/erac014.

Martín-Barranco, Amanda, Sébastien Thomine, Grégory Vert, and Enric Zelazny. 2021. “A Quick Journey into the Diversity of Iron Uptake Strategies in Photosynthetic Organisms.” Plant Signaling & Behavior, September, 1975088. https://doi.org/10.1080/15592324.2021.1975088.

Ayachi, Imen, Rim Ghabriche, Yan Kourouma, M’barek Ben Naceur, Chedly Abdelly, Sebastien Thomine, and Tahar Ghnaya. 2021. “Cd Tolerance and Accumulation in Barley: Screening of 36 North African Cultivars on Cd-Contaminated Soil.” Environmental Science and Pollution Research 28 (31): 42722–36. https://doi.org/10.1007/s11356-021-13768-y.

Belloeil, Célestine, Pierre Jouannais, Charles Malfaisan, Rolando Reyes Fernández, Severine Lopez, Dulce Montserrat Navarrete Gutierrez, Swann Maeder-Pras, et al. 2021. “The X-Ray Fluorescence Screening of Multiple Elements in Herbarium Specimens from the Neotropical Region Reveals New Records of Metal Accumulation in Plants.” Metallomics 13 (8): mfab045. https://doi.org/10.1093/mtomcs/mfab045.

Thomine, Sébastien, and Sylvain Merlot. 2021. “Manganese Matters: Feeding Manganese into the Secretory System for Cell Wall Synthesis.” The New Phytologist, July. https://doi.org/10.1111/nph.17545.

Balk, Janneke, Nicolaus von Wirén, and Sebastien Thomine. 2021. “The Iron Will of the Research Community: Advances in Iron Nutrition and Interactions in Lockdown Times.” Journal of Experimental Botany 72 (6): 2011–13. https://doi.org/10.1093/jxb/erab069.

Sanità di Toppi, Luigi, and Sébastien Thomine. 2021. “Virtual Special Issue on: ‘Positive and Negative Impact of Metal(Loid)s in Plant Physiology and Biochemistry: Basic and Applied Aspects.’” Plant Physiology and Biochemistry: PPB 162 (February):137–38. https://doi.org/10.1016/j.plaphy.2021.02.022.

Tran, Daniel, Tiffanie Girault, Marjorie Guichard, Sébastien Thomine, Nathalie Leblanc-Fournier, Bruno Moulia, Emmanuel de Langre, Jean-Marc Allain, and Jean-Marie Frachisse. 2021. “Cellular Transduction of Mechanical Oscillations in Plants by the Plasma-Membrane Mechanosensitive Channel MSL10.” Proceedings of the National Academy of Sciences 118 (1). https://doi.org/10.1073/pnas.1919402118.

Martín-Barranco, Amanda, Julien Spielmann, Guillaume Dubeaux, Grégory Vert, and Enric Zelazny. 2020. “Dynamic Control of the High-Affinity Iron Uptake Complex in Root Epidermal Cells.” Plant Physiology 184 (3): 1236–50. https://doi.org/10.1104/pp.20.00234.

Demes, Elsa, Laetitia Besse, Paloma Cubero-Font, Beatrice Satiat-Jeunemaitre, Sebastien Thomine, and Alexis De Angeli. 2020. “Dynamic Measurement of Cytosolic PH and [NO3-] Uncovers the Role of the Vacuolar Transporter AtCLCa in Cytosolic PH Homeostasis.” Proceedings of the National Academy of Sciences of the United States of America 117 (26): 15343–53. https://doi.org/10.1073/pnas.2007580117.

Garcia de la Torre, Vanesa S., Clarisse Majorel-Loulergue, Guillem J. Rigaill, Dubiel A. Gonzalez, Ludivine Soubigou-Taconnat, Yohan Pillon, Louise Barreau, et al. 2020. “Wide Cross-Species RNA-Seq Comparison Reveals Convergent Molecular Mechanisms Involved in Nickel Hyperaccumulation Across Dicotyledons.” The New Phytologist 229 (2): 994–1006. https://doi.org/10.1111/nph.16775.

Sterckeman, Thibault, and Sebastien Thomine. 2020. “Mechanisms of Cadmium Accumulation in Plants.” Critical Reviews in Plant Sciences 39 (4): 322–59. https://doi.org/10.1080/07352689.2020.1792179.

Merlot, Sylvain. 2020. “Understanding Nickel Responses in Plants: More Than Just an Interaction with Iron Homeostasis.” Plant & Cell Physiology 61 (3): 443–44. https://doi.org/10.1093/pcp/pcaa016.

Frachisse, Jean-Marie, Sébastien Thomine, and Jean-Marc Allain. 2020. “Calcium and Plasma Membrane Force-Gated Ion Channels behind Development.” Current Opinion in Plant Biology 53 (February):57–64. https://doi.org/10.1016/j.pbi.2019.10.006.

Mari, Stéphane, Christophe Bailly, and Sébastien Thomine. 2020. “Handing off Iron to the next Generation: How Does It Get into Seeds and What For?” The Biochemical Journal 477 (1): 259–74. https://doi.org/10.1042/BCJ20190188.

Chen, Qinwu, Daiki Shinozaki, Jie Luo, Mathieu Pottier, Marien Havé, Anne Marmagne, Michèle Reisdorf-Cren, et al. 2019. “Autophagy and Nutrients Management in Plants.” Cells 8 (11): 1426. https://doi.org/10.3390/cells8111426.

Perez, M., Y. Guerringue, B. Ranty, C. Pouzet, A. Jauneau, E. Robe, C. Mazars, J. P. Galaud, and D. Aldon. 2019. “Specific TCP Transcription Factors Interact with and Stabilize PRR2 within Different Nuclear Sub-Domains.” Plant Science 287 (October):110197. https://doi.org/10.1016/j.plantsci.2019.110197.

Vigani, Gianpiero, Ádám Solti, Sébastien Thomine, and Katrin Philippar. 2019. “Essential and Detrimental - an Update on Intracellular Iron Trafficking and Homeostasis.” Plant & Cell Physiology 60 (7): 1420–39. https://doi.org/10.1093/pcp/pcz091.

Pottier, Mathieu, Jean Dumont, Céline Masclaux-Daubresse, and Sébastien Thomine. 2019. “Autophagy Is Essential for Optimal Translocation of Iron to Seeds in Arabidopsis.” Journal of Experimental Botany 70 (3): 859–69. https://doi.org/10.1093/jxb/ery388.

Le Bars, Romain, Michele W. Bianchi, and Christophe Lefebvre. 2019. “Three-Dimensional Surface Rendering of ESCRT Proteins Microscopy Data Using UCSF Chimera Software.” In The ESCRT Complexes: Methods and Protocols, edited by Emmanuel Culetto and Renaud Legouis, 149–61. Methods in Molecular Biology. New York, NY: Springer. https://doi.org/10.1007/978-1-4939-9492-2_11.

Schmidt, Wolfgang, Sebastien Thomine, and Thomas J. Buckhout. 2019. “Editorial: Iron Nutrition and Interactions in Plants.” Frontiers in Plant Science 10:1670. https://doi.org/10.3389/fpls.2019.01670.

Guichard, Marjorie, Jean-Marc Allain, Michele Wolfe Bianchi, and Jean-Marie Frachisse. 2019. “Root Hair Sizer: An Algorithm for High Throughput Recovery of Different Root Hair and Root Developmental Parameters.” Plant Methods 15 (1): 104. https://doi.org/10.1186/s13007-019-0483-z.

Langre, E. de, O. Penalver, P. Hémon, J.-M. Frachisse, M.-B. Bogeat-Triboulot, B. Niez, E. Badel, and B. Moulia. 2019. “Nondestructive and Fast Vibration Phenotyping of Plants.” Plant Phenomics 2019:6379693. https://doi.org/10.34133/2019/6379693.

Pillon, Yohan, Herizo Randriambanona, Dubiel Alphonso Gonzales, Porter P. Lowry II, Tanguy Jaffré, and Sylvain Merlot. 2019. “Parallel Ecological Filtering of Ultramafic Soils in Three Distant Island Floras.” Journal of Biogeography 46 (11): 2457–65. https://doi.org/10.1111/jbi.13677.

Krieger-Liszkay, Anja, and Sébastien Thomine. 2018. “Importing Manganese into the Chloroplast: Many Membranes to Cross.” Molecular Plant 11 (9): 1109–11. https://doi.org/10.1016/j.molp.2018.07.006.

Guerringue, Yannick, Sébastien Thomine, and Jean-Marie Frachisse. 2018. “Sensing and Transducing Forces in Plants with MSL10 and DEK1 Mechanosensors.” FEBS Letters 592 (12): 1968–79. https://doi.org/10.1002/1873-3468.13102.

Bastow, Emma L., Vanesa S. Garcia de la Torre, Andrew E. Maclean, Robert T. Green, Sylvain Merlot, Sebastien Thomine, and Janneke Balk. 2018. “Vacuolar Iron Stores Gated by NRAMP3 and NRAMP4 Are the Primary Source of Iron in Germinating Seeds.” Plant Physiology 177 (3): 1267–76. https://doi.org/10.1104/pp.18.00478.

Merlot, Sylvain, Vanesa Sanchez Garcia de la Torre, and Marc Hanikenne. 2018. “Physiology and Molecular Biology of Trace Element Hyperaccumulation.” In Agromining: Farming for Metals, edited by Antony Van der Ent, Guillaume Echevarria, Alan J.M. Baker, and Jean Louis Morel, 93–116. Cham: Springer International Publishing. https://doi.org/10.1007/978-3-319-61899-9_6.

Diatloff, Eugene, Emma S. Mace, David R. Jordan, Sophie Filleur, Shuaishuai Tai, Susanne Schmidt, and Ian D. Godwin. 2017. “The Vegetative Nitrogen Response of Sorghum Lines Containing Different Alleles for Nitrate Reductase and Glutamate Synthase.” Molecular Breeding 37 (11): 138. https://doi.org/10.1007/s11032-017-0738-1.

Tran, Daniel, Roberta Galletti, Enrique D. Neumann, Annick Dubois, Reza Sharif-Naeini, Anja Geitmann, Jean-Marie Frachisse, Olivier Hamant, and Gwyneth C. Ingram. 2017. “A Mechanosensitive Ca(2+) Channel Activity Is Dependent on the Developmental Regulator DEK1.” Nature Communications 8 (1): 1009. https://doi.org/10.1038/s41467-017-00878-w.

Eisenach, Cornelia, and Alexis De Angeli. 2017. “Ion Transport at the Vacuole during Stomatal Movements.” Plant Physiology 174 (2): 520–30. https://doi.org/10.1104/pp.17.00130.

Agorio, Astrid, Jérôme Giraudat, Michele Wolfe Bianchi, Jessica Marion, Christelle Espagne, Loren Castaings, Françoise Lelièvre, Catherine Curie, Sébastien Thomine, and Sylvain Merlot. 2017. “Phosphatidylinositol 3-Phosphate–Binding Protein AtPH1 Controls the Localization of the Metal Transporter NRAMP1 in Arabidopsis.” Proceedings of the National Academy of Sciences 114 (16): E3354–63. https://doi.org/10.1073/pnas.1702975114.

Brown, Spencer C., Mickaël Bourge, Nicolas Maunoury, Maurice Wong, Michele Wolfe Bianchi, Sandra Lepers-Andrzejewski, Pascale Besse, Sonja Siljak-Yakovlev, Michel Dron, and Béatrice Satiat-Jeunemaître. 2017. “DNA Remodeling by Strict Partial Endoreplication in Orchids, an Original Process in the Plant Kingdom.” Genome Biology and Evolution 9 (4): 1051–71. https://doi.org/10.1093/gbe/evx063.

Eisenach, Cornelia, Ulrike Baetz, Nicola V. Huck, Jingbo Zhang, Alexis De Angeli, Gerold J.M. Beckers, and Enrico Martinoia. 2017. “ABA-Induced Stomatal Closure Involves ALMT4, a Phosphorylation-Dependent Vacuolar Anion Channel of Arabidopsis.” The Plant Cell 29 (10): 2552–69. https://doi.org/10.1105/tpc.17.00452.

Baetz, Ulrike, Cornelia Eisenach, Takayuki Tohge, Enrico Martinoia, and Alexis De Angeli. 2016. “Vacuolar Chloride Fluxes Impact Ion Content and Distribution during Early Salinity Stress.” Plant Physiology 172 (2): 1167–81. https://doi.org/10.1104/pp.16.00183.

Nguyen, Chi Tam, Astrid Agorio, Mathieu Jossier, Sylvain Depré, Sébastien Thomine, and Sophie Filleur. 2016. “Characterization of the Chloride Channel-Like, AtCLCg, Involved in Chloride Tolerance in Arabidopsis Thaliana.” Plant and Cell Physiology 57 (4): 764–75. https://doi.org/10.1093/pcp/pcv169.

De Angeli, Alexis, Sébastien Thomine, and Jean-Marie Frachisse. 2016. “Anion Channel Blockage by ATP as a Means for Membranes to Perceive the Energy Status of the Cell.” Molecular Plant 9 (3): 320–22. https://doi.org/10.1016/j.molp.2016.01.004.

Damiani, Isabelle, Alice Drain, Marjorie Guichard, Sandrine Balzergue, Alexandre Boscari, Jean-Christophe Boyer, Véronique Brunaud, et al. 2016. “Nod Factor Effects on Root Hair-Specific Transcriptome of Medicago Truncatula: Focus on Plasma Membrane Transport Systems and Reactive Oxygen Species Networks.” Frontiers in Plant Science 7. https://doi.org/10.3389/fpls.2016.00794.

Aznar, Aude, Nicolas W. G. Chen, Sebastien Thomine, and Alia Dellagi. 2015. “Immunity to Plant Pathogens and Iron Homeostasis.” Plant Science 240 (November):90–97. https://doi.org/10.1016/j.plantsci.2015.08.022.

Bruch, Eduardo M., Melissa T. Warner, Sébastien Thomine, Leandro C. Tabares, and Sun Un. 2015. “Pulse Electron Double Resonance Detected Multinuclear NMR Spectra of Distant and Low Sensitivity Nuclei and Its Application to the Structure of Mn(II) Centers in Organisms.” The Journal of Physical Chemistry B 119 (43): 13515–23. https://doi.org/10.1021/acs.jpcb.5b01624.