Meiotic Recombination and Pairing

Dubois, Emeline, Stéphanie Boisnard, Henri-Marc Bourbon, Kenza Yefsah, Karine Budin, Robert Debuchy, Liangran Zhang, Nancy Kleckner, Denise Zickler, and Eric Espagne. 2024. “Canonical and Noncanonical Roles of Hop1 Are Crucial for Meiotic Prophase in the Fungus Sordaria Macrospora.” PLoS Biology 22 (7): e3002705. https://doi.org/10.1371/journal.pbio.3002705.

Jones, Gareth, Nancy Kleckner, and Denise Zickler. 2024. “Meiosis through Three Centuries.” Chromosoma, May. https://doi.org/10.1007/s00412-024-00822-0.

Hensen, Noah, Lucas Bonometti, Ivar Westerberg, Ioana Onut Brännström, Sonia Guillou, Sandrine Cros-Aarteil, Sara Calhoun, et al. 2023. “Genome-Scale Phylogeny and Comparative Genomics of the Fungal Order Sordariales.” Molecular Phylogenetics and Evolution, October, 107938. https://doi.org/10.1016/j.ympev.2023.107938.

Zickler, Denise, and Nancy Kleckner. 2023. “Meiosis: Dances Between Homologs.” Annual Review of Genetics, October. https://doi.org/10.1146/annurev-genet-061323-044915.

Lo, Ying-Chu, Jade Bruxaux, Ricardo C. Rodríguez de la Vega, Samuel O’Donnell, Alodie Snirc, Monika Coton, Mélanie Le Piver, et al. 2023. “Domestication in Dry-Cured Meat Penicillium Fungi: Convergent Specific Phenotypes and Horizontal Gene Transfers without Strong Genetic Subdivision.” Evolutionary Applications 16 (9): 1637–60. https://doi.org/10.1111/eva.13591.

Girard, Chloe, David Zwicker, and Raphael Mercier. 2023. “The Regulation of Meiotic Crossover Distribution: A Coarse Solution to a Century-Old Mystery?” Biochemical Society Transactions, May, BST20221329. https://doi.org/10.1042/BST20221329.

Veller, Carl, Shunxin Wang, Denise Zickler, Liangran Zhang, and Nancy Kleckner. 2022. “Limitations of Gamete Sequencing for Crossover Analysis.” Nature 606 (7913): E1–3. https://doi.org/10.1038/s41586-022-04693-2.

Morgan, Chris, Martin A. White, F. Chris H. Franklin, Denise Zickler, Nancy Kleckner, and Kirsten Bomblies. 2021. “Evolution of Crossover Interference Enables Stable Autopolyploidy by Ensuring Pairwise Partner Connections in Arabidopsis Arenosa.” Current Biology: CB, August, S0960-9822(21)01132-5. https://doi.org/10.1016/j.cub.2021.08.028.

Girard, Chloe, Karine Budin, Stéphanie Boisnard, Liangran Zhang, Robert Debuchy, Denise Zickler, and Eric Espagne. 2021. “RNAi-Related Dicer and Argonaute Proteins Play Critical Roles for Meiocyte Formation, Chromosome-Axes Lengths and Crossover Patterning in the Fungus Sordaria Macrospora.” Frontiers in Cell and Developmental Biology 9 (June):684108. https://doi.org/10.3389/fcell.2021.684108.

Crismani, Wayne, Chloe Girard, and Andrew Lloyd. 2021. “Crossover Interference: Just ZYP It.” Proceedings of the National Academy of Sciences of the United States of America 118 (17): e2103433118. https://doi.org/10.1073/pnas.2103433118.

Girard, Chloé, Chantal C. Akerib, and Anne M. Villeneuve. 2021. “Suppression of Him-14(It44ts) by a Transgene Insertion Expressing GFP::COSA-1.” MicroPublication Biology 2021. https://doi.org/10.17912/micropub.biology.000430.

Ament-Velásquez, S. Lorena, Hanna Johannesson, Tatiana Giraud, Robert Debuchy, Sven J. Saupe, Alfons J. M. Debets, Eric Bastiaans, et al. 2020. “The Taxonomy of the Model Filamentous Fungus Podospora Anserina.” MycoKeys 75 (November):51–69. https://doi.org/10.3897/mycokeys.75.55968.

Maroc, Laetitia, Youfang Zhou-Li, Stéphanie Boisnard, and Cécile Fairhead. 2020. “A Single Ho-Induced Double-Strand Break at the MAT Locus Is Lethal in Candida Glabrata.” PLOS Genetics 16 (10): e1008627. https://doi.org/10.1371/journal.pgen.1008627.

Chu, Lingluo, Zhangyi Liang, Maria Mukhina, Jay Fisher, Nadine Vincenten, Zheng Zhang, John Hutchinson, Denise Zickler, and Nancy Kleckner. 2020. “The 3D Topography of Mitotic Chromosomes.” Molecular Cell 79 (6): 902–16. https://doi.org/10.1016/j.molcel.2020.07.002.

Li, Youfang Zhou, Stéphanie Boisnard, Adela Enache‐Angoulvant, and Cécile Fairhead. 2020. “Genome Editing in the Yeast Nakaseomyces Delphensis and Description of Its Complete Sexual Cycle.” Yeast 38 (1): 57–71. https://doi.org/https://doi.org/10.1002/yea.3522.

Denecker, Thomas, Youfang Zhou Li, Cécile Fairhead, Karine Budin, Jean-Michel Camadro, Monique Bolotin-Fukuhara, Adela Angoulvant, and Gaëlle Lelandais. 2020. “Functional Networks of Co-Expressed Genes to Explore Iron Homeostasis Processes in the Pathogenic Yeast Candida Glabrata.” NAR Genomics and Bioinformatics 2 (2): lqaa027. https://doi.org/10.1093/nargab/lqaa027.

Lebreton, Annie, Erwan Corre, Jean-Luc Jany, Loraine Brillet-Guéguen, Carlos Pèrez-Arques, Victoriano Garre, Misharl Monsoor, et al. 2020. “Comparative Genomics Applied to Mucor Species with Different Lifestyles.” BMC Genomics 21 (1): 135. https://doi.org/10.1186/s12864-019-6256-2.

Zickler, Denise. 2020. “Diter von Wettstein and The Meiotic Program of Pairing and Recombination.” Methods in Molecular Biology (Clifton, N.J.) 2124:19–35. https://doi.org/10.1007/978-1-0716-0356-7_2.

Mercier, Alex, Colin Clairet, Robert Debuchy, David Morais, Philippe Silar, and Sylvain Brun. 2019. “The Mitochondrial Translocase of the Inner Membrane PaTim54 Is Involved in Defense Response and Longevity in Podospora Anserina.” Fungal Genetics and Biology: FG & B 132 (November):103257. https://doi.org/10.1016/j.fgb.2019.103257.

Demené, Arthur, Ludovic Legrand, Jérôme Gouzy, Robert Debuchy, Gilles Saint-Jean, Olivier Fabreguettes, and Cyril Dutech. 2019. “Whole-Genome Sequencing Reveals Recent and Frequent Genetic Recombination between Clonal Lineages of Cryphonectria Parasitica in Western Europe.” Fungal Genetics and Biology 130 (September):122–33. https://doi.org/10.1016/j.fgb.2019.06.002.

Grognet, Pierre, Hélène Timpano, Florian Carlier, Jinane Aït-Benkhali, Véronique Berteaux-Lecellier, Robert Debuchy, Frédérique Bidard, and Fabienne Malagnac. 2019. “A RID-like Putative Cytosine Methyltransferase Homologue Controls Sexual Development in the Fungus Podospora Anserina.” PLoS Genetics 15 (8): e1008086. https://doi.org/10.1371/journal.pgen.1008086.

Le Cam, Bruno, Dan Sargent, Jérôme Gouzy, Joëlle Amselem, Marie-Noëlle Bellanger, Olivier Bouchez, Spencer Brown, et al. 2019. “Population Genome Sequencing of the Scab Fungal Species Venturia Inaequalis, Venturia Pirina, Venturia Aucupariae and Venturia Asperata.” G3-Genes Genomes Genetics 9 (8): 2405–14. https://doi.org/10.1534/g3.119.400047.

Dubois, Emeline, Arnaud De Muyt, Jessica L. Soyer, Karine Budin, Mathieu Legras, Tristan Piolot, Robert Debuchy, Nancy Kleckner, Denise Zickler, and Eric Espagne. 2019. “Building Bridges to Move Recombination Complexes.” Proceedings of the National Academy of Sciences of the United States of America 116 (25): 12400–409. https://doi.org/10.1073/pnas.1901237116.

Wang, Shunxin, Carl Veller, Fei Sun, Aurora Ruiz-Herrera, Yongliang Shang, Hongbin Liu, Denise Zickler, Zijiang Chen, Nancy Kleckner, and Liangran Zhang. 2019. “Per-Nucleus Crossover Covariation and Implications for Evolution.” Cell 177 (2): 326–38. https://doi.org/10.1016/j.cell.2019.02.021.

Silar, Philippe, Jean-Marc Dauget, Valerie Gautier, Pierre Grognet, Michelle Chablat, Sylvie Hermann-Le Denmat, Arnaud Couloux, Patrick Wincker, and Robert Debuchy. 2019. “A Gene Graveyard in the Genome of the Fungus Podospora Comata.” Molecular Genetics and Genomics 294 (1): 177–90. https://doi.org/10.1007/s00438-018-1497-3.

Gautier, Valerie, Laetitia Chan Ho Tong, Tinh-Suong Nguyen, Robert Debuchy, and Philippe Silar. 2018. “PaPro1 and IDC4, Two Genes Controlling Stationary Phase, Sexual Development and Cell Degeneration in Podospora Anserina.” Journal of Fungi 4 (3): UNSP 85. https://doi.org/10.3390/jof4030085.

Tessé, Sophie, Henri-Marc Bourbon, Robert Debuchy, Karine Budin, Emeline Dubois, Zhang Liangran, Romain Antoine, et al. 2017. “Asy2/Mer2: An Evolutionarily Conserved Mediator of Meiotic Recombination, Pairing, and Global Chromosome Compaction.” Genes & Development 31 (18): 1880–93. https://doi.org/10.1101/gad.304543.117.

Xie, Ning, Gwenaël Ruprich-Robert, Florence Chapeland-Leclerc, Evelyne Coppin, Hervé Lalucque, Sylvain Brun, Robert Debuchy, and Philippe Silar. 2017. “Inositol-Phosphate Signaling as Mediator for Growth and Sexual Reproduction in Podospora Anserina.” Developmental Biology 429 (1): 285–305. https://doi.org/10.1016/j.ydbio.2017.06.017.

Wang, Shunxin, Terry Hassold, Patricia Hunt, Martin A. White, Denise Zickler, Nancy Kleckner, and Liangran Zhang. 2017. “Inefficient Crossover Maturation Underlies Elevated Aneuploidy in Human Female Meiosis.” Cell 168 (6): 977-989.e17. https://doi.org/10.1016/j.cell.2017.02.002.

Zickler, Denise, and Eric Espagne. 2016. “Sordaria, a Model System to Uncover Links between Meiotic Pairing and Recombination.” Seminars in Cell & Developmental Biology 54 (June):149–57. https://doi.org/10.1016/j.semcdb.2016.02.012.

Bomblies, Kirsten, Gareth Jones, Chris Franklin, Denise Zickler, and Nancy Kleckner. 2016. “The Challenge of Evolving Stable Polyploidy: Could an Increase in ‘Crossover Interference Distance’ Play a Central Role?” Chromosoma 125 (2): 287–300. https://doi.org/10.1007/s00412-015-0571-4.

Takano-Rojas, Harumi, Denise Zickler, and Leonardo Peraza-Reyes. 2016. “Peroxisome Dynamics during Development of the Fungus Podospora Anserina.” Mycologia 108 (3): 590–602. https://doi.org/10.3852/15-112.

Zickler, Denise, and Nancy Kleckner. 2016. “A Few of Our Favorite Things: Pairing, the Bouquet, Crossover Interference and Evolution of Meiosis.” Seminars in Cell & Developmental Biology 54:135–48. https://doi.org/10.1016/j.semcdb.2016.02.024.

Dyer, P. S., P. Inderbitzin, and Debuchy, Robert. 2016. “14 Mating-Type Structure, Function, Regulation and Evolution in the Pezizomycotina.” In Growth, Differentiation and Sexuality, edited by Jürgen Wendland, 351–85. Cham: Springer International Publishing. https://doi.org/10.1007/978-3-319-25844-7_14.

Ropars, Jeanne, Ricardo C. Rodríguez de la Vega, Manuela López-Villavicencio, Jérôme Gouzy, Erika Sallet, Émilie Dumas, Sandrine Lacoste, et al. 2015. “Adaptive Horizontal Gene Transfers between Multiple Cheese-Associated Fungi.” Current Biology: CB 25 (19): 2562–69. https://doi.org/10.1016/j.cub.2015.08.025.

Liang, Zhangyi, Denise Zickler, Mara Prentiss, Frederick S. Chang, Guillaume Witz, Kazuhiro Maeshima, and Nancy Kleckner. 2015. “Chromosomes Progress to Metaphase in Multiple Discrete Steps via Global Compaction/Expansion Cycles.” Cell 161 (5): 1124–37. https://doi.org/10.1016/j.cell.2015.04.030.

Zickler, Denise, and Nancy Kleckner. 2015. “Recombination, Pairing, and Synapsis of Homologs during Meiosis.” Cold Spring Harbor Perspectives in Biology 7 (6). https://doi.org/10.1101/cshperspect.a016626.

Wang, Shunxin, Denise Zickler, Nancy Kleckner, and Liangran Zhang. 2015. “Meiotic Crossover Patterns: Obligatory Crossover, Interference and Homeostasis in a Single Process.” Cell Cycle 14 (3): 305–14. https://doi.org/10.4161/15384101.2014.991185.