Molecular Microbiology
of Actinobacteria

Jaffal, Hoda, Mounia Kortebi, Pauline Misson, Paulo Tavares, Malika Ouldali, Hervé Leh, Sylvie Lautru, Virginia S. Lioy, François Lecointe, and Stéphanie G. Bury-Moné. 2024. “Prophage Induction Can Facilitate the in Vitro Dispersal of Multicellular Streptomyces Structures.” PLoS Biology 22 (7): e3002725. https://doi.org/10.1371/journal.pbio.3002725.

Nicolle, Clément, Damien Gayrard, Alba Noël, Marion Hortala, Aurélien Amiel, Sabine Grat, Aurélie Le Ru, et al. 2024. “Root-Associated Streptomyces Produce Galbonolides to Modulate Plant Immunity and Promote Rhizosphere Colonization.” The ISME Journal, June, wrae112. https://doi.org/10.1093/ismejo/wrae112.

Haas, Drago, Matthieu Barba, Cláudia M. Vicente, Šarká Nezbedová, Amélie Garénaux, Stéphanie Bury-Moné, Jean-Noël Lorenzi, et al. 2024. “Synteruptor: Mining Genomic Islands for Non-Classical Specialized Metabolite Gene Clusters.” NAR Genomics and Bioinformatics 6 (2): lqae069. https://doi.org/10.1093/nargab/lqae069.

Lavollay, Marie, Céline Buon, Vincent Le Moigne, Fabrice Compain, Armel Guyonvarch, and Matthieu Fonvielle. 2024. “Exploration of the Role of the Penicillin Binding Protein 2c (Pbp2c) in Inducible β-Lactam Resistance in Corynebacteriaceae.” Frontiers in Microbiology 15:1327723. https://doi.org/10.3389/fmicb.2024.1327723.

Bronchain, Odile, Bertrand Ducos, Harald Putzer, Marine Delagrange, Soumaya Laalami, Laetitia Philippe-Caraty, Krystel Saroul, and Brigitte Ciapa. 2023. “Natural Antisense Transcription of Presenilin in the Sea Urchin for a General Control of Gene Expression during Development?” Journal of Cell Science 136 (14): jcs261284. https://doi.org/10.1242/jcs.261284.

Santos, Luísa D. F., Laëtitia Caraty-Philippe, Emmanuelle Darbon, and Jean-Luc Pernodet. 2022. “Marker-Free Genome Engineering in Amycolatopsis Using the PSAM2 Site-Specific Recombination System.” Microorganisms 10 (4): 828. https://doi.org/10.3390/microorganisms10040828.

Vingadassalon, Audrey, Florence Lorieux, Maud Juguet, Alba Noël, Luisa D. F. Santos, Laura Marin Fernandez, Jean-Luc Pernodet, Stéphanie Bury-Moné, and Sylvie Lautru. 2021. “Transcriptional Regulation of Congocidine (Netropsin) Biosynthesis and Resistance.” Applied and Environmental Microbiology, September, AEM0138021. https://doi.org/10.1128/AEM.01380-21.

Lioy, Virginia S., Jean-Noël Lorenzi, Soumaya Najah, Thibault Poinsignon, Hervé Leh, Corinne Saulnier, Bertrand Aigle, et al. 2021. “Dynamics of the Compartmentalized Streptomyces Chromosome during Metabolic Differentiation.” Nature Communications 12 (1): 5221. https://doi.org/10.1038/s41467-021-25462-1.

Miethke, Marcus, Marco Pieroni, Tilmann Weber, Mark Brönstrup, Peter Hammann, Ludovic Halby, Paola B. Arimondo, et al. 2021. “Towards the Sustainable Discovery and Development of New Antibiotics.” Nature Reviews. Chemistry, August, 1–24. https://doi.org/10.1038/s41570-021-00313-1.

Aubry, C. Eacute Line, Paolo Clerici, Claude Gerbaud, Laurent Micouin, Jean-Luc Pernodet, and Sylvie Lautru. 2020. “Revised Structure of Anthelvencin A and Characterization of the Anthelvencin Biosynthetic Gene Cluster.” ACS Chemical Biology 15 (4): 945–51. https://doi.org/10.1021/acschembio.9b00960.

Witwinowski, Jerzy, Mireille Moutiez, Matthieu Coupet, Isabelle Correia, Pascal Belin, Antonio Ruzzini, Corinne Saulnier, et al. 2019. “Study of Bicyclomycin Biosynthesis in Streptomyces Cinnamoneus by Genetic and Biochemical Approaches.” Scientific Reports 9 (1): 20226. https://doi.org/10.1038/s41598-019-56747-7.

Aubry, Céline, Jean-Luc Pernodet, and Sylvie Lautru. 2019. “A Set of Modular and Integrative Vectors for Synthetic Biology in Streptomyces.” Applied and Environmental Microbiology 85 (16): e00485-19. https://doi.org/10.1128/AEM.00485-19.

Najah, Soumaya, Corinne Saulnier, Jean-Luc Pernodet, and Stéphanie Bury-Moné. 2019. “Design of a Generic CRISPR-Cas9 Approach Using the Same SgRNA to Perform Gene Editing at Distinct Loci.” BMC Biotechnology 19 (1): 18. https://doi.org/10.1186/s12896-019-0509-7.

Briand, William, Ousmane Dao, Guillaume Garnier, Raphaël Guegan, Britany Marta, Clémence Maupu, Julie Miesch, et al. 2018. “Dégradation d’un anticancéreux dans les eaux usées - Une médaille d’or pour l’équipe GO Paris-Saclay.” Medecine Sciences: M/S 34 (12): 1111–14. https://doi.org/10.1051/medsci/2018304.

L’Honneur, Anne-Sophie, Hervé Leh, Fanny Laurent-Tchenio, Uriel Hazan, Flore Rozenberg, and Stéphanie Bury-Moné. 2018. “Exploring the Role of NCCR Variation on JC Polyomavirus Expression from Dual Reporter Minicircles.” PloS One 13 (6): e0199171. https://doi.org/10.1371/journal.pone.0199171.

Gondry, Muriel, Isabelle B. Jacques, Robert Thai, Morgan Babin, Nicolas Canu, Jérôme Seguin, Pascal Belin, Jean-Luc Pernodet, and Mireille Moutiez. 2018. “A Comprehensive Overview of the Cyclodipeptide Synthase Family Enriched with the Characterization of 32 New Enzymes.” Frontiers in Microbiology 9:46. https://doi.org/10.3389/fmicb.2018.00046.

Leh, Hervé, Ahmad Khodr, Marie-Christine Bouger, Bianca Sclavi, Sylvie Rimsky, and Stéphanie Bury-Moné. 2017. “Bacterial-Chromatin Structural Proteins Regulate the Bimodal Expression of the Locus of Enterocyte Effacement (LEE) Pathogenicity Island in Enteropathogenic Escherichia Coli.” MBio 8 (4). https://doi.org/10.1128/mBio.00773-17.

Najah, Soumaya, Teik Min Chong, Claude Gerbaud, Kok-Gan Chan, Lotfi Mellouli, and Jean-Luc Pernodet. 2017. “Complete Genome Sequence of Streptomyces Sp. TN58, a Producer of Acyl Alpha-l-Rhamnopyranosides.” Genome Announcements 5 (34). https://doi.org/10.1128/genomeA.00828-17.

Haas, Drago, Claude Gerbaud, Nevzat Sahin, Jean-Luc Pernodet, and Sylvie Lautru. 2017. “Draft Genome Sequence of Streptomyces Sp. M1013, a Close Relative of Streptomyces Ambofaciens and Streptomyces Coelicolor.” Genome Announcements 5 (29): e00643-17. https://doi.org/10.1128/genomeA.00643-17.

Bury-Moné, Stéphanie, and Bianca Sclavi. 2017. “Stochasticity of Gene Expression as a Motor of Epigenetics in Bacteria: From Individual to Collective Behaviors.” Research in Microbiology 168 (6): 503–14. https://doi.org/10.1016/j.resmic.2017.03.009.

Kish, Adrienne, Jean-Charles Gaillard, Jean Armengaud, and Christiane Elie. 2016. “Post-Translational Methylations of the Archaeal Mre11:Rad50 Complex throughout the DNA Damage Response.” Molecular Microbiology 100 (2): 362–78. https://doi.org/10.1111/mmi.13322.

Thibessard, Annabelle, Drago Haas, Claude Gerbaud, Bertrand Aigle, Sylvie Lautru, Jean-Luc Pernodet, and Pierre Leblond. 2015. “Complete Genome Sequence of Streptomyces Ambofaciens ATCC 23877, the Spiramycin Producer.” Journal of Biotechnology 214 (November):117–18. https://doi.org/10.1016/j.jbiotec.2015.09.020.

Li, Yanyan, Rémi Ducasse, Séverine Zirah, Alain Blond, Christophe Goulard, Ewen Lescop, Caroline Giraud, et al. 2015. “Characterization of Sviceucin from Streptomyces Provides Insight into Enzyme Exchangeability and Disulfide Bond Formation in Lasso Peptides.” ACS Chemical Biology 10 (11): 2641–49. https://doi.org/10.1021/acschembio.5b00584.

Boubakri, Hasna, Nicolas Seghezzi, Magalie Duchateau, Myriam Gominet, Olga Kofroňová, Oldřich Benada, Philippe Mazodier, and Jean-Luc Pernodet. 2015. “The Absence of Pupylation (Prokaryotic Ubiquitin-Like Protein Modification) Affects Morphological and Physiological Differentiation in Streptomyces Coelicolor.” Journal of Bacteriology 197 (21): 3388–99. https://doi.org/10.1128/JB.00591-15.

Jacques, Isabelle B., Mireille Moutiez, Jerzy Witwinowski, Emmanuelle Darbon, Cécile Martel, Jérôme Seguin, Emmanuel Favry, et al. 2015. “Analysis of 51 Cyclodipeptide Synthases Reveals the Basis for Substrate Specificity.” Nature Chemical Biology 11 (9): 721–27. https://doi.org/10.1038/nchembio.1868.

Medema, Marnix H., Renzo Kottmann, Pelin Yilmaz, Matthew Cummings, John B. Biggins, Kai Blin, Irene de Bruijn, et al. 2015. “Minimum Information about a Biosynthetic Gene Cluster.” Nature Chemical Biology 11 (9): 625–31. https://doi.org/10.1038/nchembio.1890.

Vingadassalon, Audrey, Florence Lorieux, Maud Juguet, Géraldine Le Goff, Claude Gerbaud, Jean-Luc Pernodet, and Sylvie Lautru. 2015. “Natural Combinatorial Biosynthesis Involving Two Clusters for the Synthesis of Three Pyrrolamides in Streptomyces Netropsis.” ACS Chemical Biology 10 (2): 601–10. https://doi.org/10.1021/cb500652n.