Proteomics - Gif (SICaPS)

Publications

Labarre, Cécile, Yijie Zhang, Emilie Lesur, Marie Ley, Laila Sago, Christiane Dietrich, Célia de Sousa-d’Auria, et al. 2024. “Bioorthogonal Monomycolate of Trehalose Disclosed the O-Mycoloylation of Mycoloyltransferases and Other Cell Envelope Proteins in C. Glutamicum.” ACS Chemical Biology, October. https://doi.org/10.1021/acschembio.4c00502.
Louçã, Mathilde, Donya El Akrouti, Aude Lemesle, Morgane Louessard, Noëlle Dufour, Chloé Baroin, Aurore de la Fouchardière, et al. 2024. “Corrigendum to ‘Huntingtin Lowering Impairs the Maturation and Synchronized Synaptic Activity of Human Cortical Neuronal Networks Derived from Induced Pluripotent Stem Cells’ [Neurobiology of Disease Volume 200 (2024, Oct 1st) - Article# YNBDI_106630].” Neurobiology of Disease, October, 106703. https://doi.org/10.1016/j.nbd.2024.106703.
Ropert, Baptiste, Sylvie Bannwarth, Emmanuelle C. Genin, Loan Vaillant-Beuchot, Sandra Lacas-Gervais, Blandine Madji Hounoum, Aurore Bernardin, et al. 2024. “Nifuroxazide Rescues the Deleterious Effects Due to CHCHD10-Associated MICOS Defects in Disease Models.” Brain: A Journal of Neurology, October, awae348. https://doi.org/10.1093/brain/awae348.
Papadopoulos, Chris, Hugo Arbes, David Cornu, Nicolas Chevrollier, Sandra Blanchet, Paul Roginski, Camille Rabier, et al. 2024. “The Ribosome Profiling Landscape of Yeast Reveals a High Diversity in Pervasive Translation.” Genome Biology 25 (1): 268. https://doi.org/10.1186/s13059-024-03403-7.
Louçã, Mathilde, Donya El Akrouti, Aude Lemesle, Morgane Louessard, Noëlle Dufour, Chloé Baroin, Aurore de la Fouchardière, et al. 2024. “Huntingtin Lowering Impairs the Maturation and Synchronized Synaptic Activity of Human Cortical Neuronal Networks Derived from Induced Pluripotent Stem Cells.” Neurobiology of Disease 200 (August):106630. https://doi.org/10.1016/j.nbd.2024.106630.
Guedes, Joana P., Jean Baptiste Boyer, Jasmine Elurbide, Beatriz Carte, Virginie Redeker, Laila Sago, Thierry Meinnel, Manuela Côrte-Real, Carmela Giglione, and Rafael Aldabe. 2024. “NatB Protects Procaspase-8 from UBR4-Mediated Degradation and Is Required for Full Induction of the Extrinsic Apoptosis Pathway.” Molecular and Cellular Biology, August, 1–14. https://doi.org/10.1080/10985549.2024.2382453.
Karri, Sabrina, David Cornu, Claudia Serot, Lynda Biri, Aurélie Hatton, Elise Dréanot, Camille Rullaud, et al. 2024. “TLN468 Changes the Pattern of TRNA Used to Read through Premature Termination Codons in CFTR.” Journal of Cystic Fibrosis: Official Journal of the European Cystic Fibrosis Society, August, S1569-1993(24)00802-6. https://doi.org/10.1016/j.jcf.2024.07.017.
Palayam, Malathy, Linyi Yan, Ugrappa Nagalakshmi, Amelia K. Gilio, David Cornu, François-Didier Boyer, Savithramma P. Dinesh-Kumar, and Nitzan Shabek. 2024. “Structural Insights into Strigolactone Catabolism by Carboxylesterases Reveal a Conserved Conformational Regulation.” Nature Communications 15 (1): 6500. https://doi.org/10.1038/s41467-024-50928-3.
Lejeune, Clara, David Cornu, Laila Sago, Virginie Redeker, and Marie-Joelle Virolle. 2023. “The Stringent Response Is Strongly Activated in the Antibiotic Producing Strain, Streptomyces Coelicolor.” Research in Microbiology, December, 104177. https://doi.org/10.1016/j.resmic.2023.104177.
Minić, Simeon, Burkhard Annighöfer, Arnaud Hélary, Laïla Sago, David Cornu, Annie Brûlet, and Sophie Combet. 2022. “Structure of Proteins under Pressure: Covalent Binding Effects of Biliverdin on β-Lactoglobulin.” Biophysical Journal 0 (0). https://doi.org/10.1016/j.bpj.2022.06.003.
Lejeune, Clara, Laila Sago, David Cornu, Virginie Redeker, and Marie-Joelle Virolle. 2022. “A Proteomic Analysis Indicates That Oxidative Stress Is the Common Feature Triggering Antibiotic Production in Streptomyces Coelicolor and in the PptA Mutant of Streptomyces Lividans.” Frontiers in Microbiology 12 (March). https://www.frontiersin.org/article/10.3389/fmicb.2021.813993.
Guercio, Angelica M., Salar Torabi, David Cornu, Marion Dalmais, Abdelhafid Bendahmane, Christine Le Signor, Jean-Paul Pillot, et al. 2022. “Structural and Functional Analyses Explain Pea KAI2 Receptor Diversity and Reveal Stereoselective Catalysis during Signal Perception.” Communications Biology 5 (1): 1–16. https://doi.org/10.1038/s42003-022-03085-6.
Busset, Nicolas, Djamel Gully, Albin Teulet, Joël Fardoux, Alicia Camuel, David Cornu, Dany Severac, Eric Giraud, and Peter Mergaert. 2021. “The Type III Effectome of the Symbiotic Bradyrhizobium Vignae Strain ORS3257.” Biomolecules 11 (11): 1592. https://doi.org/10.3390/biom11111592.
Herbert, Christopher J., Sylvie Labarre-Mariotte, David Cornu, Cyrielle Sophie, Cristina Panozzo, Thomas Michel, Geneviève Dujardin, and Nathalie Bonnefoy. 2021. “Translational Activators and Mitoribosomal Isoforms Cooperate to Mediate MRNA-Specific Translation in Schizosaccharomyces Pombe Mitochondria.” Nucleic Acids Research, October, gkab789. https://doi.org/10.1093/nar/gkab789.
Caroux, Emilie, Virginie Redeker, Karine Madiona, and Ronald Melki. 2021. “Structural Mapping Techniques Distinguish the Surfaces of Fibrillar 1N3R and 1N4R Human Tau.” The Journal of Biological Chemistry 297 (5): 101252. https://doi.org/10.1016/j.jbc.2021.101252.
Ciardo, Diletta, Olivier Haccard, Hemalatha Narassimprakash, David Cornu, Ida Chiara Guerrera, Arach Goldar, and Kathrin Marheineke. 2021. “Polo-like Kinase 1 (Plk1) Regulates DNA Replication Origin Firing and Interacts with Rif1 in Xenopus.” Nucleic Acids Research 49 (17): 9851–69. https://doi.org/10.1093/nar/gkab756.
Saint Germain, Alexandre de, Anse Jacobs, Guillaume Brun, Jean-Bernard Pouvreau, Lukas Braem, David Cornu, Guillaume Clavé, et al. 2021. “A Phelipanche Ramosa KAI2 Protein Perceives Strigolactones and Isothiocyanates Enzymatically.” Plant Communications 2 (5): 100166. https://doi.org/10.1016/j.xplc.2021.100166.
Labarre, Cécile, Nathalie Dautin, Anna Grzegorzewicz, Mary Jackson, Michael McNeil, Niloofar Mohiman, Laila Sago, and Nicolas Bayan. 2021. “S16 and T18 Mannosylation Sites of LppX Are Not Essential for Its Activity in Phthiocerol Dimycocerosates Localization at the Surface of Mycobacterium Tuberculosis.” Research in Microbiology, September, 103874. https://doi.org/10.1016/j.resmic.2021.103874.
Lopez-Obando, Mauricio, Ambre Guillory, François-Didier Boyer, David Cornu, Beate Hoffmann, Philippe Le Bris, Jean-Bernard Pouvreau, et al. 2021. “The Physcomitrium (Physcomitrella) Patens PpKAI2L Receptors for Strigolactones and Related Compounds Function via MAX2-Dependent and Independent Pathways.” The Plant Cell, August, koab217. https://doi.org/10.1093/plcell/koab217.
Shikura, Noriyasu, Emmanuelle Darbon, Catherine Esnault, Ariane Deniset-Besseau, Delin Xu, Clara Lejeune, Eric Jacquet, et al. 2021. “The Phosin PptA Plays a Negative Role in the Regulation of Antibiotic Production in Streptomyces Lividans.” Antibiotics 10 (3): 325. https://doi.org/10.3390/antibiotics10030325.
Laleve, Anais, Cristina Panozzo, Inge Kühl, Alexa Bourand-Plantefol, Jelena Ostojic, Abdoulaye Sissoko, Déborah Tribouillard-Tanvier, et al. 2020. “Artemisinin and Its Derivatives Target Mitochondrial C-Type Cytochromes in Yeast and Human Cells.” Biochimica Et Biophysica Acta. Molecular Cell Research 1867 (5): 118661. https://doi.org/10.1016/j.bbamcr.2020.118661.
Dautin, Nathalie, Manuela Argentini, Niloofar Mohiman, Cécile Labarre, David Cornu, Laila Sago, Mohamed Chami, et al. 2020. “Role of the Unique, Non-Essential Phosphatidylglycerol::Prolipoprotein Diacylglyceryl Transferase (Lgt) in Corynebacterium Glutamicum.” Microbiology, 166 (8): 759–76. https://doi.org/10.1099/mic.0.000937.
Pelosi, Ludovic, Chau-Duy-Tam Vo, Sophie Saphia Abby, Laurent Loiseau, Bérengère Rascalou, Mahmoud Hajj Chehade, Bruno Faivre, et al. 2019. “Ubiquinone Biosynthesis over the Entire O2 Range: Characterization of a Conserved O2-Independent Pathway.” MBio 10 (4). https://doi.org/10.1128/mBio.01319-19.
Li, Si-Zhe, Armelle Vigouroux, Mohammed Ahmar, Abbas El Sahili, Laurent Soulere, Laila Sago, David Cornu, Solange Morera, and Yves Queneau. 2019. “Synthesis of a Non-Natural Glucose-2-Phosphate Ester Able to Dupe the Acc System of Agrobacterium Fabrum.” Organic & Biomolecular Chemistry 17 (5): 1090–96. https://doi.org/10.1039/c8ob03086c.
Szabó, Áron, Christian Papin, David Cornu, Elisabeth Chélot, Zoltán Lipinszki, Andor Udvardy, Virginie Redeker, Ugo Mayor, and François Rouyer. 2018. “Ubiquitylation Dynamics of the Clock Cell Proteome and TIMELESS during a Circadian Cycle.” Cell Reports 23 (8): 2273–82. https://doi.org/10.1016/j.celrep.2018.04.064.
Blanchet, Sandra, David Cornu, Isabelle Hatin, Henri Grosjean, Pierre Bertin, and Olivier Namy. 2018. “Deciphering the Reading of the Genetic Code by Near-Cognate TRNA.” Proceedings of the National Academy of Sciences 115 (12): 3018–23. https://doi.org/10.1073/pnas.1715578115.
Hammad, Ghania, Yona Legrain, Zahia Touat-Hamici, Stéphane Duhieu, David Cornu, Anne-Laure Bulteau, and Laurent Chavatte. 2018. “Interplay between Selenium Levels and Replicative Senescence in WI-38 Human Fibroblasts: A Proteomic Approach.” Antioxidants 7 (1): 19. https://doi.org/10.3390/antiox7010019.
Gronenborn, Bruno, John W. Randles, Dennis Knierim, Quentin Barrière, H. Josef Vetten, Norman Warthmann, David Cornu, Tiata Sileye, Stephan Winter, and Tatiana Timchenko. 2018. “Analysis of DNAs Associated with Coconut Foliar Decay Disease Implicates a Unique Single-Stranded DNA Virus Representing a New Taxon.” Scientific Reports 8 (1): 5698. https://doi.org/10.1038/s41598-018-23739-y.
Bou-Nader, Charles, Ludovic Pecqueur, David Cornu, Murielle Lombard, Manuela Dezi, Magali Nicaise, Christophe Velours, Marc Fontecave, and Djemel Hamdane. 2017. “Power of Protein/TRNA Functional Assembly against Aberrant Aggregation.” Physical Chemistry Chemical Physics: PCCP, October. https://doi.org/10.1039/c7cp05599d.
Bou-Nader, Charles, David Cornu, Vincent Guerineau, Thibault Fogeron, Marc Fontecave, and Djemel Hamdane. 2017. “Enzyme Activation with a Synthetic Catalytic Co-Enzyme Intermediate: Nucleotide Methylation by Flavoenzymes.” Angewandte Chemie (International Ed. in English), August. https://doi.org/10.1002/anie.201706219.
Loiseau, Laurent, Cameron Fyfe, Laurent Aussel, Mahmoud Hajj Chehade, Sara B. Hernández, Bruno Faivre, Djemel Hamdane, et al. 2017. “The UbiK Protein Is an Accessory Factor Necessary for Bacterial Ubiquinone (UQ) Biosynthesis and Forms a Complex with the UQ Biogenesis Factor UbiJ.” The Journal of Biological Chemistry, May. https://doi.org/10.1074/jbc.M117.789164.
Saint Germain, Alexandre de, Guillaume Clavé, Marie-Ange Badet-Denisot, Jean-Paul Pillot, David Cornu, Jean-Pierre Le Caer, Marco Burger, et al. 2016. “An Histidine Covalent Receptor and Butenolide Complex Mediates Strigolactone Perception.” Nature Chemical Biology 12 (10): 787–94. https://doi.org/10.1038/nchembio.2147.
Eychenne, Thomas, Elizaveta Novikova, Marie-Bénédicte Barrault, Olivier Alibert, Claire Boschiero, Nuno Peixeiro, David Cornu, et al. 2016. “Functional Interplay between Mediator and TFIIB in Preinitiation Complex Assembly in Relation to Promoter Architecture.” Genes & Development 30 (18): 2119–32. https://doi.org/10.1101/gad.285775.116.
Hamdane, Djemel, Christophe Velours, David Cornu, Magali Nicaise, Murielle Lombard, and Marc Fontecave. 2016. “A Chemical Chaperone Induces Inhomogeneous Conformational Changes in Flexible Proteins.” Physical Chemistry Chemical Physics: PCCP 18 (30): 20410–21. https://doi.org/10.1039/c6cp03635j.
Rémion, Azaria, Fawzi Khoder-Agha, David Cornu, Manuela Argentini, Virginie Redeker, and Marc Mirande. 2016. “Identification of Protein Interfaces within the Multi-Aminoacyl-TRNA Synthetase Complex: The Case of Lysyl-TRNA Synthetase and the Scaffold Protein P38.” FEBS Open Bio 6 (7): 696–706. https://doi.org/10.1002/2211-5463.12074.
Yi, Zhou, Marion Manil-Ségalen, Laila Sago, Annie Glatigny, Virginie Redeker, Renaud Legouis, and Marie-Hélène Mucchielli-Giorgi. 2016. “SAFER, an Analysis Method of Quantitative Proteomic Data, Reveals New Interactors of the C. Elegans Autophagic Protein LGG-1.” Journal of Proteome Research 15 (5): 1515–23. https://doi.org/10.1021/acs.jproteome.5b01158.
Aillaud, Chrystelle, Christophe Bosc, Yasmina Saoudi, Eric Denarier, Leticia Peris, Laila Sago, Nicolas Taulet, et al. 2016. “Evidence for New C-Terminally Truncated Variants of α- and β-Tubulins.” Molecular Biology of the Cell 27 (4): 640–53. https://doi.org/10.1091/mbc.E15-03-0137.
Hai, Jun, Nawal Serradji, Ludovic Mouton, Virginie Redeker, David Cornu, Jean-Michel El Hage Chahine, Philippe Verbeke, and Miryana Hémadi. 2016. “Targeted Delivery of Amoxicillin to C. Trachomatis by the Transferrin Iron Acquisition Pathway.” PloS One 11 (2): e0150031. https://doi.org/10.1371/journal.pone.0150031.
Eyboulet, Fanny, Sandra Wydau-Dematteis, Thomas Eychenne, Olivier Alibert, Helen Neil, Claire Boschiero, Marie-Claire Nevers, et al. 2015. “Mediator Independently Orchestrates Multiple Steps of Preinitiation Complex Assembly in Vivo.” Nucleic Acids Research 43 (19): 9214–31. https://doi.org/10.1093/nar/gkv782.
Hamdane, Djemel, Charles Bou-Nader, David Cornu, Gaston Hui-Bon-Hoa, and Marc Fontecave. 2015. “Flavin–Protein Complexes: Aromatic Stacking Assisted by a Hydrogen Bond.” Biochemistry 54 (28): 4354–64. https://doi.org/10.1021/acs.biochem.5b00501.

Publications collaboratives de la plateforme

 

2020

Artemisinin and its derivatives target mitochondrial c-type cytochromes in yeast and human cells.

Laleve A, Panozzo C, Kühl I, Bourand-Plantefol A, Ostojic J, Sissoko A, Tribouillard-Tanvier D, Cornu D, Burg A, Meunier B, Blondel M, Clain J, Bonnefoy N, Duval R, Dujardin G. Biochim Biophys Acta Mol Cell Res. 2020 May;1867(5):118661. doi: 10.1016/j.bbamcr.2020.118661. Epub 2020 Jan 25.

 

2019

Ubiquinone Biosynthesis over the Entire O2 Range: Characterization of a Conserved O2-Independent Pathway.

Pelosi L, Vo CD, Abby SS, Loiseau L, Rascalou B, Hajj Chehade M, Faivre B, Goussé M, Chenal C, Touati N, Binet L, Cornu D, Fyfe CD, Fontecave M, Barras F, Lombard M, Pierrel F. mBio. 2019 Jul 9;10(4). pii: e01319-19. doi: 10.1128/mBio.01319-19.

 

Synthesis of a non-natural glucose-2-phosphate ester able to dupe the acc system of agrobacterium fabrum.

Li SZ, Vigouroux A, Ahmar M, El Sahili A, Soulere l, Sago l, Cornu D, Morera S, Gueneau Y. Org biomol chem. 2019 jan 31;17(5):1090-1096. Doi: 10.1039/c8ob03086c.

 

2018

Ubiquitylation Dynamics of the Clock Cell Proteome and TIMELESS during a Circadian Cycle.

Szabó Á, Papin C, Cornu D, Chélot E, Lipinszki Z, Udvardy A, Redeker V, Mayor U, Rouyer F. Cell Rep. 2018 May 22;23(8):2273-2282. doi: 10.1016/j.celrep.2018.04.064.

 

Analysis of DNAs associated with coconut foliar decay disease implicates a unique single-stranded DNA virus representing a new taxon. Gronenborn B, Randles JW, Knierim D, Barrière Q, Vetten HJ, Warthmann N, Cornu D, Sileye T, Winter S, Timchenko T. Sci Rep. 2018 Apr 9;8(1):5698. doi: 10.1038/s41598-018-23739-y.

 

Deciphering the reading of the genetic code by near-cognate tRNA. Blanchet S, Cornu D, Hatin I, Grosjean H, Bertin P, Namy O. Proc Natl Acad Sci U S A. 2018 Mar 20;115(12):3018-3023. doi: 10.1073/pnas.1715578115. Epub 2018 Mar 5.

 

Factors influencing readthrough therapy for frequent cystic fibrosis premature termination codons. Pranke I, Bidou L, Martin N, Blanchet S, Hatton A, Karri S, Cornu D, Costes B, Chevalier B, Tondelier D, Girodon E, Coupet M, Edelman A, Fanen P, Namy O, Sermet-Gaudelus I, Hinzpeter A. ERJ Open Res. 2018 Feb 23;4(1). pii: 00080-2017. doi: 10.1183/23120541.00080-2017. eCollection 2018 Jan. Erratum in: ERJ Open Res. 2018 Jul 13;4(3):.

 

Interplay between Selenium Levels and Replicative Senescence in WI-38 Human Fibroblasts: A Proteomic Approach. Hammad G, Legrain Y, Touat-Hamici Z, Duhieu S, Cornu D, Bulteau AL, Chavatte L. Antioxidants (Basel). 2018 Jan 20;7(1). pii: E19. doi: 10.3390/antiox7010019.

 

2017

Power of protein/tRNA functional assembly against aberrant aggregation. Bou-Nader C, Pecqueur L, Cornu D, Lombard M, Dezi M, Nicaise M, Velours C, Fontecave M, Hamdane D. Phys Chem Chem Phys. 2017 Oct 25;19(41):28014-28027. doi: 10.1039/c7cp05599d

 

Enzyme Activation with a Synthetic Catalytic Co-enzyme Intermediate: Nucleotide Methylation by Flavoenzymes. Bou-Nader C, Cornu D, Guerineau V, Fogeron T, Fontecave M, Hamdane D. Angew Chem Int Ed Engl. 2017 Oct 2;56(41):12523-12527. doi: 10.1002/anie.201706219. Epub 2017 Sep 5.

 

The UbiK protein is an accessory factor necessary for bacterial ubiquinone (UQ) biosynthesis and forms a complex with the UQ biogenesis factor UbiJ.

Loiseau L, Fyfe C, Aussel L, Hajj Chehade M, Hernández SB, Faivre B, Hamdane D, Mellot-Draznieks C, Rascalou B, Pelosi L, Velours C, Cornu D, Lombard M, Casadesús J, Pierrel F, Fontecave M, Barras F. J Biol Chem. 2017 Jul 14;292(28):11937-11950. doi: 10.1074/jbc.M117.789164. Epub 2017 May 30.

 

2016

Functional interplay between Mediator and TFIIB in preinitiation complex assembly in relation to promoter architecture.

Eychenne T, Novikova E, Barrault MB, Alibert O, Boschiero C, Peixeiro N, Cornu D, Redeker V, Kuras L, Nicolas P, Werner M, Soutourina J.

Genes Dev. 2016 Sep 15;30(18):2119-2132. Epub 2016 Sep 29.

 

An histidine covalent receptor and butenolide complex mediates strigolactone perception.

de Saint Germain A, Clavé G, Badet-Denisot MA, Pillot JP, Cornu D, Le Caer JP, Burger M, Pelissier F, Retailleau P, Turnbull C, Bonhomme S, Chory J, Rameau C, Boyer FD. Nat Chem Biol. 2016 Oct;12(10):787-794. doi: 10.1038/nchembio.2147. Epub 2016 Aug 1.

 

A chemical chaperone induces inhomogeneous conformational changes in flexible proteins.

Hamdane D, Velours C, Cornu D, Nicaise M, Lombard M, Fontecave M. Phys Chem Chem Phys. 2016 Jul 27;18(30):20410-21. doi: 10.1039/c6cp03635j.

 

Identification of protein interfaces within the multi-aminoacyl-tRNA synthetase complex: the case of lysyl-tRNA synthetase and the scaffold protein p38.

Rémion A, Khoder-Agha F, Cornu D, Argentini M, Redeker V, Mirande M. FEBS Open Bio. 2016 May 25;6(7):696-706. doi: 10.1002/2211-5463.12074. eCollection 2016 Jul.

 

Targeted Delivery of Amoxicillin to C. trachomatis by the Transferrin Iron Acquisition Pathway.

Hai J, Serradji N, Mouton L, Redeker V, Cornu D, El Hage Chahine JM, Verbeke P, Hémadi M. PLoS One. 2016 Feb 26;11(2):e0150031. doi: 10.1371/journal.pone.0150031. eCollection 2016.

 

SAFER, an Analysis Method of Quantitative Proteomic Data, Reveals New Interactors of the C. elegans Autophagic Protein LGG-1.

Yi Z, Manil-Ségalen M, Sago L, Glatigny A, Redeker V, Legouis R, Mucchielli-Giorgi MH. J Proteome Res. 2016 May 6;15(5):1515-23. doi: 10.1021/acs.jproteome.5b01158. Epub 2016 Apr 6.

 

Evidence for new C-terminally truncated variants of α- and β-tubulins.

Aillaud C, Bosc C, Saoudi Y, Denarier E, Peris L, Sago L, Taulet N, Cieren A, Tort O, Magiera MM, Janke C, Redeker V, Andrieux A, Moutin MJ. Mol Biol Cell. 2016 Feb 15;27(4):640-53. doi: 10.1091/mbc.E15-03-0137. Epub 2016 Jan 6.

 

2015

Mediator independently orchestrates multiple steps of preinitiation complex assembly in vivo.

Eyboulet F, Wydau-Dematteis S, Eychenne T, Alibert O, Neil H, Boschiero C, Nevers MC, Volland H, Cornu D, Redeker V, Werner M, Soutourina J. Nucleic Acids Res. 2015 Oct 30;43(19):9214-31. doi: 10.1093/nar/gkv782. Epub 2015 Aug 3.

 

Flavin-Protein Complexes: Aromatic Stacking Assisted by a Hydrogen Bond.

Hamdane D, Bou-Nader C, Cornu D, Hui-Bon-Hoa G, Fontecave M. Biochemistry. 2015 Jul 21;54(28):4354-64. doi: 10.1021/acs.biochem.5b00501. Epub 2015 Jul 8.

 

Mammalian frataxin directly enhances sulfur transfer of NFS1 persulfide to both ISCU and free thiols.

Parent A, Elduque X, Cornu D, Belot L, Le Caer JP, Grandas A, Toledano MB, D’Autréaux B. Nat Commun. 2015 Jan 19;6:5686. doi: 10.1038/ncomms6686.

 

 

 

 

Publications protéomiques des équipes d’adossement

 

2020

Differential Membrane Binding and Seeding of Distinct α-Synuclein Fibrillar Polymorphs.

Shrivastava AN, Bousset L, Renner M, Redeker V, Savistchenko J, Triller A, Melki R. Biophys J. 2020 Jan 28. pii: S0006-3495(20)30069-2. doi: 10.1016/j.bpj.2020.01.022.

 

NatB-Mediated N-Terminal Acetylation Affects Growth and Biotic Stress Responses.

Huber M, Bienvenut WV, Linster E, Stephan I, Armbruster L, Sticht C, Layer D, Lapouge K, Meinnel T, Sinning I, Giglione C, Hell R, Wirtz M. Plant Physiol. 2020 Feb;182(2):792-806. doi: 10.1104/pp.19.00792. Epub 2019 Nov 19.

 

2019

Clustering of Tau fibrils impairs the synaptic composition of α3-Na+/K+-ATPase and AMPA receptors.

Shrivastava AN, Redeker V, Pieri L, Bousset L, Renner M, Madiona K, Mailhes-Hamon C, Coens A, Buée L, Hantraye P, Triller A, Melki R. EMBO J. 2019 Feb 1;38(3). pii: e99871. doi: 10.15252/embj.201899871. Epub 2019 Jan 10.

 

 

2018

Structural and genomic decoding of human and plant myristoylomes reveals a definitive recognition pattern.

Castrec B, Dian C, Ciccone S, Ebert CL, Bienvenut WV, Le Caer JP, Steyaert JM, Giglione C, Meinnel T. Nat Chem Biol. 2018 Jul;14(7):671-679. doi: 10.1038/s41589-018-0077-5. Epub 2018 Jun 11.

 

 

2017

The C-terminal residue of phage Vp16 PDF, the smallest peptide deformylase, acts as an offset element locking the active conformation.

Grzela R, Nusbaum J, Fieulaine S, Lavecchia F, Bienvenut WV, Dian C, Meinnel T, Giglione C. Sci Rep. 2017 Sep 8;7(1):11041. doi: 10.1038/s41598-017-11329-3.

 

EnCOUNTer: a parsing tool to uncover the mature N-terminus of organelle-targeted proteins in complex samples.

Bienvenut WV, Scarpelli JP, Dumestier J, Meinnel T, Giglione C. BMC Bioinformatics. 2017 Mar 20;18(1):182. doi: 10.1186/s12859-017-1595-y.

 

SILProNAQ: A Convenient Approach for Proteome-Wide Analysis of Protein N-Termini and N-Terminal Acetylation Quantitation.

Bienvenut WV, Giglione C, Meinnel T. Methods Mol Biol. 2017;1574:17-34. doi: 10.1007/978-1-4939-6850-3_3.

 

2016

Data in support of the identification of neuronal and astrocyte proteins interacting with extracellularly applied oligomeric and fibrillar α-synuclein assemblies by mass spectrometry.

Shrivastava AN, Redeker V, Fritz N, Pieri L, Almeida LG, Spolidoro M, Liebmann T, Bousset L, Renner M, Léna C, Aperia A, Melki R, Triller A. Data Brief. 2016 Feb 12;7:221-8. doi: 10.1016/j.dib.2016.02.018. eCollection 2016 Jun

 

Cellular response of human neuroblastoma cells to α-synuclein fibrils, the main constituent of Lewy bodies.

Pieri L, Chafey P, Le Gall M, Clary G, Melki R, Redeker V. Biochim Biophys Acta. 2016 Jan;1860(1 Pt A):8-19. doi: 10.1016/j.bbagen.2015.10.007. Epub 2015 Oct 22.

 

MetAP1 and MetAP2 drive cell selectivity for a potent anti-cancer agent in synergy, by controlling glutathione redox state.

Frottin F, Bienvenut WV, Bignon J, Jacquet E, Vaca Jacome AS, Van Dorsselaer A, Cianferani S, Carapito C, Meinnel T, Giglione C.

Oncotarget. 2016 Sep 27;7(39):63306-63323. doi: 10.18632/oncotarget.11216.

 

2015

α-synuclein assemblies sequester neuronal α3-Na+/K+-ATPase and impair Na+ gradient.

Shrivastava AN, Redeker V, Fritz N, Pieri L, Almeida LG, Spolidoro M, Liebmann T, Bousset L, Renner M, Léna C, Aperia A, Melki R, Triller A.NEMBO J. 2015 Oct 1;34(19):2408-23. doi: 10.15252/embj.201591397. Epub 2015 Aug 31.

 

The 26S Proteasome Degrades the Soluble but Not the Fibrillar Form of the Yeast Prion Ure2p In Vitro.

Wang K, Redeker V, Madiona K, Melki R, Kabani M.NPLoS One. 2015 Jun 26;10(6):e0131789. doi: 10.1371/journal.pone.0131789. Collection 2015.

 

A novel bio-orthogonal cross-linker for improved protein/protein interaction analysis.

Nury C, Redeker V, Dautrey S, Romieu A, van der Rest G, Renard PY, Melki R, Chamot-Rooke J.NAnal Chem. 2015 Feb 3;87(3):1853-60. doi: 10.1021/ac503892c. Epub 2015 Jan 12.

 

Downregulation of N-terminal acetylation triggers ABA-mediated drought responses in Arabidopsis.

Linster E, Stephan I, Bienvenut WV, Maple-Grødem J, Myklebust LM, Huber M, Reichelt M, Sticht C, Møller SG, Meinnel T, Arnesen T, Giglione C, Hell R, Wirtz M. Nat Commun. 2015 Jul 17;6:7640. doi: 10.1038/ncomms8640.

 

Proteome-wide analysis of the amino terminal status of Escherichia coli proteins at the steady-state and upon deformylation inhibition.

Bienvenut WV, Giglione C, Meinnel T.

Proteomics. 2015 Jul;15(14):2503-18. doi: 10.1002/pmic.201500027.

 

Two N-terminal acetyltransferases antagonistically regulate the stability of a nod-like receptor in Arabidopsis.

Xu F, Huang Y, Li L, Gannon P, Linster E, Huber M, Kapos P, Bienvenut W, Polevoda B, Meinnel T, Hell R, Giglione C, Zhang Y, Wirtz M, Chen S, Li X. Plant Cell. 2015 May;27(5):1547-62. doi: 10.1105/tpc.15.00173. Epub 2015 May 12.

 

Molecular identification and functional characterization of the first Nα-acetyltransferase in plastids by global acetylome profiling.

Dinh TV, Bienvenut WV, Linster E, Feldman-Salit A, Jung VA, Meinnel T, Hell R, Giglione C, Wirtz M. Proteomics. 2015 Jul;15(14):2426-35. doi: 10.1002/pmic.201500025. Epub 2015 Jun 18.

 

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