Light Microscopy

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Publications

Monteiro-Cardoso, Vera Filipa, Romain Le Bars, and Francesca Giordano. 2023. “Visualization and Quantification of Endogenous Intra-Organelle Protein Interactions at ER-Mitochondria Contact Sites by Proximity Ligation Assays.” Journal of Visualized Experiments: JoVE, no. 200 (October). https://doi.org/10.3791/64750.
Scrima, Nathalie, Romain Le Bars, Quentin Nevers, Damien Glon, Guillaume Chevreux, Ahmet Civas, Danielle Blondel, Cécile Lagaudrière-Gesbert, and Yves Gaudin. 2023. “Rabies Virus P Protein Binds to TBK1 and Interferes with the Formation of Innate Immunity-Related Liquid Condensates.” Cell Reports 42 (1): 111949. https://doi.org/10.1016/j.celrep.2022.111949.
Nevers, Quentin, Nathalie Scrima, Damien Glon, Romain Le Bars, Alice Decombe, Nathalie Garnier, Malika Ouldali, et al. 2022. “Properties of Rabies Virus Phosphoprotein and Nucleoprotein Biocondensates Formed in Vitro and in Cellulo.” PLOS Pathogens 18 (12): e1011022. https://doi.org/10.1371/journal.ppat.1011022.
Monteiro-Cardoso, Vera F., Leila Rochin, Amita Arora, Audrey Houcine, Eeva Jääskeläinen, Annukka M. Kivelä, Cécile Sauvanet, et al. 2022. “ORP5/8 and MIB/MICOS Link ER-Mitochondria and Intra-Mitochondrial Contacts for Non-Vesicular Transport of Phosphatidylserine.” Cell Reports 40 (12). https://doi.org/10.1016/j.celrep.2022.111364.
Borgne, Pierrick Le, Logan Greibill, Marine Hélène Laporte, Michel Lemullois, Khaled Bouhouche, Mebarek Temagoult, Olivier Rosnet, et al. 2022. “The Evolutionary Conserved Proteins CEP90, FOPNL, and OFD1 Recruit Centriolar Distal Appendage Proteins to Initiate Their Assembly.” PLOS Biology 20 (9): e3001782. https://doi.org/10.1371/journal.pbio.3001782.
Schellenbauer, Amelie, Marie-Noelle Guilly, Romain Grall, Romain Le Bars, Vincent Paget, Thierry Kortulewski, Haser Sutcu, et al. 2021. “Phospho-Ku70 Induced by DNA Damage Interacts with RNA Pol II and Promotes the Formation of Phospho-53BP1 Foci to Ensure Optimal CNHEJ.” Nucleic Acids Research, October, gkab980. https://doi.org/10.1093/nar/gkab980.
Nicoud, Quentin, Quentin Barrière, Nicolas Busset, Sara Dendene, Dmitrii Travin, Mickaël Bourge, Romain Le Bars, et al. 2021. “Sinorhizobium Meliloti Functions Required for Resistance to Antimicrobial NCR Peptides and Bacteroid Differentiation.” MBio 12 (4): e0089521. https://doi.org/10.1128/mBio.00895-21.
Nicoud, Quentin, Florian Lamouche, Anaïs Chaumeret, Thierry Balliau, Romain Le Bars, Mickaël Bourge, Fabienne Pierre, et al. 2021. “Bradyrhizobium Diazoefficiens USDA110 Nodulation of Aeschynomene Afraspera Is Associated with Atypical Terminal Bacteroid Differentiation and Suboptimal Symbiotic Efficiency.” MSystems 6 (3): e01237-20. https://doi.org/10.1128/mSystems.01237-20.
Song, Zhimin, Elodie Hudik, Romain Le Bars, Blandine Roux, Pham My-Chan Dang, Jamel El Benna, Oliver Nusse, and Sophie Dupre-Crochet. 2020. “Class I Phosphoinositide 3-Kinases Control Sustained NADPH Oxidase Activation in Adherent Neutrophils.” Biochemical Pharmacology 178 (August): 114088. https://doi.org/10.1016/j.bcp.2020.114088.
Demes, Elsa, Laetitia Besse, Paloma Cubero-Font, Beatrice Satiat-Jeunemaitre, Sebastien Thomine, and Alexis De Angeli. 2020. “Dynamic Measurement of Cytosolic PH and [NO3-] Uncovers the Role of the Vacuolar Transporter AtCLCa in Cytosolic PH Homeostasis.” Proceedings of the National Academy of Sciences of the United States of America 117 (26): 15343–53. https://doi.org/10.1073/pnas.2007580117.
Abello, Arthur, Vinciane Régnier, Olivier Arnaiz, Romain Le Bars, Mireille Bétermier, and Julien Bischerour. 2020. “Functional Diversification of Paramecium Ku80 Paralogs Safeguards Genome Integrity during Precise Programmed DNA Elimination.” PLoS Genetics 16 (4): e1008723. https://doi.org/10.1371/journal.pgen.1008723.
Rochin, Leila, Cécile Sauvanet, Eeva Jääskeläinen, Audrey Houcine, Annukka Kivelä, Xingjie Ma, Eyra Marien, et al. 2020. “ORP5 Transfers Phosphatidylserine To Mitochondria And Regulates Mitochondrial Calcium Uptake At Endoplasmic Reticulum - Mitochondria Contact Sites.” BioRxiv, 695577. https://doi.org/10.1101/695577.
Boulogne, C., C. Gillet, L. Hughes, R. Le Bars, A. Canette, C. R. Hawes, and B. Satiat‐Jeunemaitre. 2020. “Functional Organisation of the Endomembrane Network in the Digestive Gland of the Venus Flytrap: Revisiting an Old Story with a New Microscopy Toolbox.” Journal of Microscopy 280 (2): 86–103. https://doi.org/https://doi.org/10.1111/jmi.12957.
Joly, Jérémy, Elodie Hudik, Sandrine Lecart, Dirk Roos, Paul Verkuijlen, Dominik Wrona, Ulrich Siler, Janine Reichenbach, Oliver Nüsse, and Sophie Dupré-Crochet. 2020. “Membrane Dynamics and Organization of the Phagocyte NADPH Oxidase in PLB-985 Cells.” Frontiers in Cell and Developmental Biology 8. https://doi.org/10.3389/fcell.2020.608600.
Le Bars, Romain, Michele W. Bianchi, and Christophe Lefebvre. 2019. “Three-Dimensional Surface Rendering of ESCRT Proteins Microscopy Data Using UCSF Chimera Software.” In The ESCRT Complexes: Methods and Protocols, edited by Emmanuel Culetto and Renaud Legouis, 149–61. Methods in Molecular Biology. New York, NY: Springer. https://doi.org/10.1007/978-1-4939-9492-2_11.
Avin-Wittenberg, Tamar, Frantisek Baluška, Peter V. Bozhkov, Pernilla H. Elander, Alisdair R. Fernie, Gad Galili, Ammar Hassan, et al. 2018. “Corrigendum: Autophagy-Related Approaches for Improving Nutrient Use Efficiency and Crop Yield Protection.” Journal of Experimental Botany 69 (12): 3173. https://doi.org/10.1093/jxb/ery113.
Avin-Wittenberg, Tamar, Frantisek Baluška, Peter V Bozhkov, Pernilla H Elander, Alisdair R Fernie, Gad Galili, Ammar Hassan, et al. 2018. “Autophagy-Related Approaches for Improving Nutrient Use Efficiency and Crop Yield Protection.” Edited by Chris Hawes. Journal of Experimental Botany 69 (6): 1335–53. https://doi.org/10.1093/jxb/ery069.
Marion, Jessica, Romain Le Bars, Laetitia Besse, Henri Batoko, and Béatrice Satiat-Jeunemaitre. 2018. “Multiscale and Multimodal Approaches to Study Autophagy in Model Plants.” Cells 7 (1): 5. https://doi.org/10.3390/cells7010005.
Nikolic, Jovan, Romain Le Bars, Zoé Lama, Nathalie Scrima, Cécile Lagaudrière-Gesbert, Yves Gaudin, and Danielle Blondel. 2017. “Negri Bodies Are Viral Factories with Properties of Liquid Organelles.” Nature Communications 8 (1): 58. https://doi.org/10.1038/s41467-017-00102-9.
Becker, Loïc, Sébastien Bellow, Vincent Carré, Gwendal Latouche, Anne Poutaraud, Didier Merdinoglu, Spencer C. Brown, Zoran G. Cerovic, and Patrick Chaimbault. 2017. “Correlative Analysis of Fluorescent Phytoalexins by Mass Spectrometry Imaging and Fluorescence Microscopy in Grapevine Leaves.” Analytical Chemistry, June. https://doi.org/10.1021/acs.analchem.7b01002.
Marion, Jessica, Romain Le Bars, Béatrice Satiat-Jeunemaitre, and Claire Boulogne. 2017. “Optimizing CLEM Protocols for Plants Cells: GMA Embedding and Cryosections as Alternatives for Preservation of GFP Fluorescence in Arabidopsis Roots.” Journal of Structural Biology 198 (3): 196–202. https://doi.org/10.1016/j.jsb.2017.03.008.
Brown, Spencer C., Mickaël Bourge, Nicolas Maunoury, Maurice Wong, Michele Wolfe Bianchi, Sandra Lepers-Andrzejewski, Pascale Besse, Sonja Siljak-Yakovlev, Michel Dron, and Béatrice Satiat-Jeunemaître. 2017. “DNA Remodeling by Strict Partial Endoreplication in Orchids, an Original Process in the Plant Kingdom.” Genome Biology and Evolution 9 (4): 1051–71. https://doi.org/10.1093/gbe/evx063.
Song, Zhi Min, Leïla Bouchab, Elodie Hudik, Romain Le Bars, Oliver Nüsse, and Sophie Dupré-Crochet. 2017. “Phosphoinositol 3-Phosphate Acts as a Timer for Reactive Oxygen Species Production in the Phagosome.” Journal of Leukocyte Biology, January, jlb.1A0716-305R. https://doi.org/10.1189/jlb.1A0716-305R.
Dambroise, Emilie, Matthieu Simion, Thomas Bourquard, Stéphanie Bouffard, Barbara Rizzi, Yan Jaszczyszyn, Mickaël Bourge, et al. 2017. “Postembryonic Fish Brain Proliferation Zones Exhibit Neuroepithelial-Type Gene Expression Profile: Features of Neuroepithelial Cells in Fish.” STEM CELLS. https://doi.org/10.1002/stem.2588.
Pétriacq, Pierre, Linda de Bont, Lucie Genestout, Jingfang Hao, Constance Laureau, Igor Florez-Sarasa, Touhami Rzigui, et al. 2017. “Photoperiod Affects the Phenotype of Mitochondrial Complex I Mutants.” Plant Physiology 173 (1): 434–55. https://doi.org/10.1104/pp.16.01484.
Dubois, Emeline, Nathalie Mathy, Vinciane Régnier, Julien Bischerour, Céline Baudry, Raphaëlle Trouslard, and Mireille Bétermier. 2017. “Multimerization Properties of PiggyMac, a Domesticated PiggyBac Transposase Involved in Programmed Genome Rearrangements.” Nucleic Acids Research 45 (6): 3204–16. https://doi.org/10.1093/nar/gkw1359.
Chaintreuil, Clémence, Djamel Gully, Catherine Hervouet, Panlada Tittabutr, Herizo Randriambanona, Spencer C. Brown, Gwilym P. Lewis, et al. 2016. “The Evolutionary Dynamics of Ancient and Recent Polyploidy in the African Semiaquatic Species of the Legume Genus Aeschynomene.” The New Phytologist 211 (3): 1077–91. https://doi.org/10.1111/nph.13956.
Galli, Elisa, Mickaël Poidevin, Romain Le Bars, Jean-Michel Desfontaines, Leila Muresan, Evelyne Paly, Yoshiharu Yamaichi, and François-Xavier Barre. 2016. “Cell Division Licensing in the Multi-Chromosomal Vibrio Cholerae Bacterium.” Nature Microbiology 1 (9): 16094. https://doi.org/10.1038/nmicrobiol.2016.94.
Hajrudinović, Alma, Sonja Siljak-Yakovlev, Spencer C. Brown, Fatima Pustahija, Mickael Bourge, Dalibor Ballian, and Faruk Bogunić. 2015. “When Sexual Meets Apomict: Genome Size, Ploidy Level and Reproductive Mode Variation of Sorbus Aria s.l. and S. Austriaca (Rosaceae) in Bosnia and Herzegovina.” Annals of Botany 116 (2): 301–12. https://doi.org/10.1093/aob/mcv093.
Bourbousse, Clara, Imen Mestiri, Gerald Zabulon, Mickaël Bourge, Fabio Formiggini, Maria A. Koini, Spencer C. Brown, Paul Fransz, Chris Bowler, and Fredy Barneche. 2015. “Light Signaling Controls Nuclear Architecture Reorganization during Seedling Establishment.” Proceedings of the National Academy of Sciences 112 (21): E2836–44. https://doi.org/10.1073/pnas.1503512112.
Bourge, Mickaël, Cécile Fort, Marie-Noëlle Soler, Béatrice Satiat-Jeunemaître, and Spencer C. Brown. 2015. “A Pulse-Chase Strategy Combining Click-EdU and Photoconvertible Fluorescent Reporter: Tracking Golgi Protein Dynamics during the Cell Cycle.” New Phytologist 205 (2): 938–50. https://doi.org/10.1111/nph.13069.

2014 - 2011

Le Bars, R., Marion, J., Satiat-Jeunemaitre, B. & Bianchi, M. W. Folding into an autophagosome. Autophagy 10, 1861–1863 (2014).

Le Bars, R., Marion, J., Le Borgne, R., Satiat-Jeunemaitre, B. & Bianchi, M. W. ATG5 defines a phagophore domain connected to the endoplasmic reticulum during autophagosome formation in plants. Nature Communications 5, 4121 (2014).

Larrieu, D., Rodriguez, R. & Britton, S. Chemical inhibition of NAT10 corrects defects of laminopathic cells. Med Sci (Paris) 30, 745–747 (2014).

Bialik, S., Pietrokovski, S. & Kimchi, A. Myosin drives autophagy in a pathway linking Atg1 to Atg9. EMBO J 30, 629–630 (2011).

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